RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PLEKHG4BQ96PX9 1271 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 TRIM39Q9HCM9 518 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 TBC1D29Q9UFV1 150 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 PKP3Q9Y446 797 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 PCDHGA7Q9Y5G6 932 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 PCYT1BQ9Y5K3 369 aaPredicted RBP19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 DUSP10Q9Y6W6 482 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 FASNP49327 2511 aaKnown RBP19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 IGHV1OR21-1A0A087WYE8 117 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 TEX51A0A1B0GUA7 166 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 BTNL10A8MVZ5 291 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 AURKAO14965 403 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 PJA2O43164 708 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 MTX2O75431 263 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 ANXA9O76027 345 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 TJP3O95049 919 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 RBL1P28749 1068 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 CHRNA4P43681 627 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 FASLGP48023 281 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 GEMP55040 296 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 EIF3EP60228 445 aaKnown RBP19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 KIF5AQ12840 1032 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 PRPSAP1Q14558 356 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 SOWAHCQ53LP3 525 aaPredicted RBP19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 ZDHHC20Q5W0Z9 365 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 TMPRSS9Q7Z410 1059 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 PEX26Q7Z412 305 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 LRRTM4Q86VH4 590 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 UBL4BQ8N7F7 174 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 AVL9Q8NBF6 648 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 SPC24Q8NBT2 197 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 RCBTB1Q8NDN9 531 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 CCDC112Q8NEF3 446 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 SH3KBP1Q96B97 665 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 OXNAD1Q96HP4 312 aaPredicted RBP19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 TTC25Q96NG3 672 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 DPYSL5Q9BPU6 564 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 GBA3Q9H227 469 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 KLC4Q9NSK0 619 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 DNAJC16Q9Y2G8 782 aa19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 REXO2Q9Y3B8 237 aaKnown RBP19.62■□□□□ 0.73
SHROOM1-204ENST00000440118 BAHCC1Q9P281 2608 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 PDZK1P1A8MUH7 402 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 HGSO14964 777 aaPredicted RBP19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 EPOP01588 193 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 F3P13726 295 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 MPSTP25325 297 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 CD1CP29017 333 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 CSTF2P33240 577 aaKnown RBP eCLIP19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 HMGCLP35914 325 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 SPAM1P38567 509 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 C16orf72Q14CZ0 275 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 SLC1A5Q15758 541 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 DARS2Q6PI48 645 aaKnown RBP19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 FAM151BQ6UXP7 276 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 ADGRG6Q86SQ4 1221 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 TRAPPC5Q8IUR0 188 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 TRIM48Q8IWZ4 208 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 SYCE1Q8N0S2 351 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 OR4D9Q8NGE8 314 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 LRRC45Q96CN5 670 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 MRGPRX2Q96LB1 330 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 ZCCHC2Q9C0B9 1178 aaKnown RBP19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 LACRTQ9GZZ8 138 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 C10orf88Q9H8K7 445 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 SARS2Q9NP81 518 aaKnown RBP19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 AMFRQ9UKV5 643 aa19.61■□□□□ 0.73
SHROOM1-204ENST00000440118 KIR2DS5A0A0G2JLQ3 304 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 PRAMEF33A0A0G2JMD5 474 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 A0A0G2JNG1 304 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 IGHV5-10-1A0A0J9YXX1 117 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 LOC285095A0A1B0GVY8 99 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 GRID2IPA4D2P6 1211 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 GOLGA6L9A6NEM1 432 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 OR5K4A6NMS3 321 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 KIR2DS3K7RE56 304 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 KMOO15229 486 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 KCNN4O15554 427 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 VEGFDO43915 354 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 PRAMEF10O60809 474 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 CDK14O94921 469 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 EML2O95834 649 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 RBP3P10745 1247 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 VCLP18206 1134 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 CSF2RBP32927 897 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 PTPN7P35236 360 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 VAC14Q08AM6 782 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 CLN3Q13286 438 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 TRA2AQ13595 282 aaKnown RBP eCLIP19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 KIR2DS5Q14953 304 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 SEPT7Q16181 437 aaKnown RBP19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 SNAP47Q5SQN1 464 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 CCDC81Q6ZN84 652 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 GAS2L3Q86XJ1 694 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 USP7Q93009 1102 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 FAM118BQ9BPY3 351 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 DESI2Q9BSY9 194 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 FICDQ9BVA6 458 aa19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.6■□□□□ 0.73
SHROOM1-204ENST00000440118 EFR3BQ9Y2G0 817 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms