RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 OR2T12Q8NG77 320 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 MCFD2Q8NI22 146 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 PNPT1Q8TCS8 783 aaKnown RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 PTERQ96BW5 349 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 ZHX1-C8orf76Q96EF9 292 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 TRIM54Q9BYV2 358 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 EHD1Q9H4M9 534 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 POU2F3Q9UKI9 436 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 ITGB1BP2Q9UKP3 347 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 POLR3HQ9Y535 204 aaPredicted RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 KIAA1217Q5T5P2 1943 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 A6NL46 340 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 RAD51BO15315 384 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 B3GAT3O94766 335 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 OR4F21O95013 312 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 CTSHP09668 335 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 TCEA1P23193 301 aaKnown RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 S100A5P33763 92 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 AGTR2P50052 363 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 ST13P50502 369 aaKnown RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 ALDH3A2P51648 485 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 SOX4Q06945 474 aaPredicted RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 SYT16Q17RD7 645 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 DALRD3Q5D0E6 543 aaKnown RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 ANKRD34AQ69YU3 496 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 TIGD7Q6NT04 549 aaPredicted RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 APOBEC3FQ8IUX4 373 aaKnown RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 ATG16L2Q8NAA4 619 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 OR13F1Q8NGS4 319 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 SH3YL1Q96HL8 342 aaPredicted RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 ZFYVE19Q96K21 471 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 B3GALT6Q96L58 329 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 FCRL5Q96RD9 977 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 UGT2B28Q9BY64 529 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 ACTR8Q9H981 624 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.99□□□□□ -0.978e-7■■■■□ 23.9
COPB1-202ENST00000439561 GALPQ9UBC7 116 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 C3orf18Q9UK00 162 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 GIT1Q9Y2X7 761 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 FAM32AQ9Y421 112 aaKnown RBP8.99□□□□□ -0.97
COPB1-202ENST00000439561 PCDHGA8Q9Y5G5 932 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 WNK3Q9BYP7 1800 aa8.99□□□□□ -0.97
COPB1-202ENST00000439561 TARM1B6A8C7 271 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 TAF4O00268 1085 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 TNPO2O14787 897 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 APOA1P02647 267 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 GSNP06396 782 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 SKIV2LQ15477 1246 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 ZRANB3Q5FWF4 1079 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 COLEC12Q5KU26 742 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 ISCA2Q86U28 154 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 METTL23Q86XA0 190 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 MINDY1Q8N5J2 469 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 PDPRQ8NCN5 879 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 SCAMP5Q8TAC9 235 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 STAG3L4Q8TBR4 150 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 TMEM125Q96AQ2 219 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 ULK4Q96C45 1275 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 SLC47A1Q96FL8 570 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 TEX37Q96LM6 180 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 AMBNQ9NP70 447 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 NDFIP2Q9NV92 336 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 INVSQ9Y283 1065 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 TMED5Q9Y3A6 229 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 ARL5AQ9Y689 179 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 ZNF99A8MXY4 864 aaPredicted RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 I6L893 689 aaPredicted RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 CD3EAPO15446 510 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 AQP9O43315 295 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 PRSS56P0CW18 603 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 HSD17B1P14061 328 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 ARNTP27540 789 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 PRDX3P30048 256 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 RENBPP51606 427 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 NCS1P62166 190 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 RPL38P63173 70 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 CYP4F2P78329 520 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 CYP4F3Q08477 520 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 LCP2Q13094 533 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 KCNJ8Q15842 424 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 C6orf141Q5SZD1 244 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 SDHAF4Q5VUM1 108 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 DCLRE1AQ6PJP8 1040 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 PAQR3Q6TCH7 311 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 ANGPTL8Q6UXH0 198 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 MOB2Q70IA6 237 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 P2RY8Q86VZ1 359 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 P3H2Q8IVL5 708 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 SPARTQ8N0X7 666 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 CADM3Q8N126 398 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 OR13C4Q8NGS5 318 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 NDNFQ8TB73 568 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 S100ZQ8WXG8 99 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 MTFMTQ96DP5 389 aaKnown RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 EXOC2Q96KP1 924 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 GAD1Q99259 594 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 C11orf84Q9BUA3 381 aaPredicted RBP8.98□□□□□ -0.97
COPB1-202ENST00000439561 LRRC3Q9BY71 257 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 RUBCNLQ9H714 662 aa8.98□□□□□ -0.97
COPB1-202ENST00000439561 SIAEQ9HAT2 523 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms