RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TOE1Q96GM8 510 aaKnown RBP22.79■■□□□ 1.24
CPSF4-204ENST00000436336 WSB2Q9NYS7 404 aaPredicted RBP22.79■■□□□ 1.24
CPSF4-204ENST00000436336 C10orf142B7Z368 130 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 PYGBP11216 843 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 STMN1P16949 149 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 SAT1P21673 171 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 TEAD1P28347 426 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 SLC18A2Q05940 514 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 ZKSCAN8Q15776 578 aaPredicted RBP22.78■■□□□ 1.24
CPSF4-204ENST00000436336 CMC1Q7Z7K0 106 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 CABS1Q96KC9 395 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 KLF6Q99612 283 aaPredicted RBP22.78■■□□□ 1.24
CPSF4-204ENST00000436336 SSU72Q9NP77 194 aaKnown RBP22.78■■□□□ 1.24
CPSF4-204ENST00000436336 GNPTGQ9UJJ9 305 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 CNOT6Q9ULM6 557 aaKnown RBP22.78■■□□□ 1.24
CPSF4-204ENST00000436336 CEP192Q8TEP8 1941 aa22.78■■□□□ 1.24
CPSF4-204ENST00000436336 GOLGA8RI6L899 631 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 K7ESF4 209 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 SLC25A14O95258 325 aaPredicted RBP22.77■■□□□ 1.24
CPSF4-204ENST00000436336 MPOP05164 745 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 PCCBP05166 539 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 BRAFP15056 766 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 CREB1P16220 341 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 MAT2AP31153 395 aaKnown RBP22.77■■□□□ 1.24
CPSF4-204ENST00000436336 CCNFP41002 786 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 CSRP3P50461 194 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 TAS2R39P59534 338 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 RAB10P61026 200 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 CTSL3PQ5NE16 218 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 ADAMTSL4Q6UY14 1074 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 PLA2G15Q8NCC3 412 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 CENPTQ96BT3 561 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 DCUN1D1Q96GG9 259 aa22.77■■□□□ 1.24
CPSF4-204ENST00000436336 IGHV1OR15-9A0A0B4J2B8 117 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 TMEM221A6NGB7 291 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 CFAP99D6REC4 459 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 M0R296 226 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 INPP4BO15327 924 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 RALBP11234 206 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 CD9P21926 228 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 FDXRP22570 491 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 AKT1P31749 480 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 B4GALNT1Q00973 533 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 IRF4Q15306 451 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 CCDC97Q96F63 343 aaPredicted RBP22.77■■□□□ 1.23
CPSF4-204ENST00000436336 LENG8Q96PV6 779 aaPredicted RBP22.77■■□□□ 1.23
CPSF4-204ENST00000436336 OLFM1Q99784 485 aa22.77■■□□□ 1.23
CPSF4-204ENST00000436336 MBNL1Q9NR56 388 aaKnown RBP22.77■■□□□ 1.23
CPSF4-204ENST00000436336 H3BMM5 538 aa22.76■■□□□ 1.23
CPSF4-204ENST00000436336 MSH3P20585 1137 aa22.76■■□□□ 1.23
CPSF4-204ENST00000436336 CRABP2P29373 138 aa22.76■■□□□ 1.23
CPSF4-204ENST00000436336 HPDP32754 393 aaPredicted RBP22.76■■□□□ 1.23
CPSF4-204ENST00000436336 PXNP49023 591 aaPredicted RBP22.76■■□□□ 1.23
CPSF4-204ENST00000436336 RAPH1Q70E73 1250 aa22.76■■□□□ 1.23
CPSF4-204ENST00000436336 CEP97Q8IW35 865 aa22.76■■□□□ 1.23
CPSF4-204ENST00000436336 DENND6BQ8NEG7 585 aa22.76■■□□□ 1.23
CPSF4-204ENST00000436336 POPDC3Q9HBV1 291 aa22.76■■□□□ 1.23
CPSF4-204ENST00000436336 PCMTD2Q9NV79 361 aa22.76■■□□□ 1.23
CPSF4-204ENST00000436336 SPATA6Q9NWH7 488 aaPredicted RBP22.76■■□□□ 1.23
CPSF4-204ENST00000436336 PRSS21Q9Y6M0 314 aa22.76■■□□□ 1.23
CPSF4-204ENST00000436336 NCOR1O75376 2440 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 A0A096LPK6 155 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 LATO43561 262 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 RHOBTB1O94844 696 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 C2P06681 752 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 ATP1B2P14415 290 aaPredicted RBP22.75■■□□□ 1.23
CPSF4-204ENST00000436336 NR1D1P20393 614 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 CCR5P51681 352 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 CDKN2DP55273 166 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 PPP2R2AP63151 447 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 PDE1CQ14123 709 aaPredicted RBP22.75■■□□□ 1.23
CPSF4-204ENST00000436336 TAF1BQ53T94 588 aaPredicted RBP22.75■■□□□ 1.23
CPSF4-204ENST00000436336 KIAA0895LQ68EN5 471 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 PTRHD1Q6GMV3 140 aaKnown RBP22.75■■□□□ 1.23
CPSF4-204ENST00000436336 MACC1Q6ZN28 852 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 KRT222Q8N1A0 295 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 CLDN19Q8N6F1 224 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 BANPQ8N9N5 519 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 RLN3Q8WXF3 142 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 KCNJ9Q92806 393 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 HIC2Q96JB3 615 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 C6orf106Q9H6K1 298 aaPredicted RBP22.75■■□□□ 1.23
CPSF4-204ENST00000436336 TAS2R13Q9NYV9 303 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.75■■□□□ 1.23
CPSF4-204ENST00000436336 TLK1Q9UKI8 766 aa22.75■■□□□ 1.23
CPSF4-204ENST00000436336 SLC31A1O15431 190 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 PHGDHO43175 533 aaKnown RBP22.74■■□□□ 1.23
CPSF4-204ENST00000436336 VPS26AO75436 327 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 TRIM23P36406 574 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 CCDC91Q7Z6B0 441 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 HEATR4Q86WZ0 1026 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 COX14Q96I36 57 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 APOPT1Q96IL0 206 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 GPR174Q9BXC1 333 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 TEX101Q9BY14 249 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 ZCCHC2Q9C0B9 1178 aaKnown RBP22.74■■□□□ 1.23
CPSF4-204ENST00000436336 VPS11Q9H270 941 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 MKS1Q9NXB0 559 aa22.74■■□□□ 1.23
CPSF4-204ENST00000436336 SMG5Q9UPR3 1016 aaKnown RBP22.74■■□□□ 1.23
CPSF4-204ENST00000436336 MED16Q9Y2X0 877 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms