RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 TRIT1Q9H3H1 467 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TOR3AQ9H497 397 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 RPRD1BQ9NQG5 326 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 ACTR3BQ9P1U1 418 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 PCDHB3Q9Y5E6 796 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 NCF1BA6NI72 391 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 NCF1CA8MVU1 366 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 PPEF2O14830 753 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 FAM20BO75063 409 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 RPLP2P05387 115 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 USP17L7P0C7H9 530 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 SLC35E2BP0CK96 405 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 BMP4P12644 408 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 NCF1P14598 390 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 AGXTP21549 392 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 HTR1BP28222 390 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 GABRB3P28472 473 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 FMO3P31513 532 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 IFNA8P32881 189 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 RFC2P35250 354 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 MAGEA6P43360 314 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 FLT3LGP49771 235 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 CCT8P50990 548 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 BCL2A1Q16548 175 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ARHGAP17Q68EM7 881 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 CYS1Q717R9 158 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ITIH5Q86UX2 942 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ADGRG5Q8IZF4 528 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 SPARTQ8N0X7 666 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 OR52K2Q8NGK3 314 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ROPN1LQ96C74 230 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 LRRC58Q96CX6 371 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 FEM1CQ96JP0 617 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 BBS2Q9BXC9 721 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 BCO2Q9BYV7 579 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 DPEP3Q9H4B8 488 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 AKTIPQ9H8T0 292 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 NMRK2Q9NPI5 230 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 INTS10Q9NVR2 710 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 MTMR10Q9NXD2 777 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 TMEM181Q9P2C4 612 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 SLC45A1Q9Y2W3 748 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 BOLA1Q9Y3E2 137 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 UTRNP46939 3433 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ERI2A8K979 691 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 FAM155AB1AL88 458 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 NPHS1O60500 1241 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ENDOD1O94919 500 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 RBP1P09455 135 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ITIH1P19827 911 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 PRKACGP22612 351 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 MAP2K4P45985 399 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 NPY2RP49146 381 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ARSFP54793 590 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ATP6V0D1P61421 351 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 SYT16Q17RD7 645 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 SLC26A9Q7LBE3 791 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 RETREG3Q86VR2 466 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 COLGALT2Q8IYK4 626 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 DCP1BQ8IZD4 617 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 DEPDC4Q8N2C3 294 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ATPAF2Q8N5M1 289 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ZNF540Q8NDQ6 660 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ATL1Q8WXF7 558 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ZUFSPQ96AP4 578 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 CDK5RAP1Q96SZ6 601 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ROGDIQ9GZN7 287 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 MAGEE1Q9HCI5 957 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 LTB4R2Q9NPC1 389 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ADPRHL2Q9NX46 363 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 SNX8Q9Y5X2 465 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 PCNTO95613 3336 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 MAGEB16A2A368 324 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 UNCXA6NJT0 531 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 SUPT3HB4E1H0 165 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ARHGEF9O43307 516 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 NUAK1O60285 661 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 MED26O95402 600 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 AP2A1O95782 977 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ANGPTL1O95841 491 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 HMBSP08397 361 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 INHBBP09529 407 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 IQCF3P0C7M6 154 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 HSMCR30P0CW71 290 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 CHRNB1P11230 501 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ZNF37AP17032 561 aaPredicted RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 LBPP18428 481 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 LMO2P25791 158 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 CD52P31358 61 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 AQP6Q13520 282 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 PFKFB4Q16877 469 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ATP6AP1LQ52LC2 224 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 C6orf141Q5SZD1 244 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 FAM45BPQ6NSW5 357 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ESRP1Q6NXG1 681 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 USP43Q70EL4 1123 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 CEP97Q8IW35 865 aa7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 ASCC1Q8N9N2 400 aaKnown RBP7.36□□□□□ -1.23
SYNPO2-203ENST00000434046 FAM45AQ8TCE6 357 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms