RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GORABQ5T7V8 394 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 MFSD6Q6ZSS7 791 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 SPATA5Q8NB90 893 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 MORC4Q8TE76 937 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 VGLL1Q99990 258 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 RBM4BQ9BQ04 359 aaKnown RBP3.36□□□□□ -1.87
PTPN4-205ENST00000433888 TMEM47Q9BQJ4 181 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 MYH16Q9H6N6 1097 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 MRPS28Q9Y2Q9 187 aaKnown RBP3.36□□□□□ -1.87
PTPN4-205ENST00000433888 JRKLQ9Y4A0 524 aa3.36□□□□□ -1.87
PTPN4-205ENST00000433888 DCXO43602 365 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 NADKO95544 446 aaPredicted RBP3.35□□□□□ -1.87
PTPN4-205ENST00000433888 IGHV4-38-2P0DP08 117 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 HOXC9P31274 260 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 RAB6CQ53S08 254 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 C10orf62Q5T681 223 aaPredicted RBP3.35□□□□□ -1.87
PTPN4-205ENST00000433888 PAPD4Q6PIY7 484 aaKnown RBP3.35□□□□□ -1.87
PTPN4-205ENST00000433888 PCGF1Q9BSM1 259 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 ISCA1Q9BUE6 129 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 RAB6CQ9H0N0 254 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 SLC6A13Q9NSD5 602 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 PPP1R14DQ9NXH3 145 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 MPP6Q9NZW5 540 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 ASIC3Q9UHC3 531 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 GPR52Q9Y2T5 361 aa3.35□□□□□ -1.87
PTPN4-205ENST00000433888 AAR2Q9Y312 384 aaKnown RBP3.35□□□□□ -1.87
PTPN4-205ENST00000433888 MEIOCA2RUB1 952 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 PLEKHD1A6NEE1 506 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 M0QZ24 198 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 TNPO2O14787 897 aaKnown RBP3.34□□□□□ -1.87
PTPN4-205ENST00000433888 NBNO60934 754 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 MLYCDO95822 493 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 NR3C1P04150 777 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 PRICKLE4Q2TBC4 344 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 METTL7BQ6UX53 244 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 BMPERQ8N8U9 685 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 DNAAF4Q8WXU2 420 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 KLHL29Q96CT2 875 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 CABLES2Q9BTV7 478 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 USP44Q9H0E7 712 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 RAD21L1Q9H4I0 556 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 TRPC7Q9HCX4 862 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 SIX2Q9NPC8 291 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 ASAH2Q9NR71 780 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 KCNJ14Q9UNX9 436 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 ZNF646O15015 1829 aaPredicted RBP3.34□□□□□ -1.87
PTPN4-205ENST00000433888 FLT1P17948 1338 aa3.34□□□□□ -1.87
PTPN4-205ENST00000433888 FAM237AA0A1B0GTK4 181 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 E9PQ18 207 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 H0YIN7 160 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 HS3ST1O14792 307 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 LDHAP00338 332 aaKnown RBP3.33□□□□□ -1.88
PTPN4-205ENST00000433888 TFAP2AP05549 437 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 GATA1P15976 413 aaPredicted RBP3.33□□□□□ -1.88
PTPN4-205ENST00000433888 MCCP23508 829 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 GGT5P36269 586 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 MAD2L1Q13257 205 aaPredicted RBP3.33□□□□□ -1.88
PTPN4-205ENST00000433888 ADAMTSL4-AS1Q5T5F5 129 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 NAA35Q5VZE5 725 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 TMED8Q6PL24 325 aaPredicted RBP3.33□□□□□ -1.88
PTPN4-205ENST00000433888 LDHAL6AQ6ZMR3 332 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 CCDC13Q8IYE1 715 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 ANKRD52Q8NB46 1076 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 EVI5LQ96CN4 794 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 APOPT1Q96IL0 206 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 ARPC5LQ9BPX5 153 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 PSD2Q9BQI7 771 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 GPR63Q9BZJ6 419 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 KCND2Q9NZV8 630 aa3.33□□□□□ -1.88
PTPN4-205ENST00000433888 IGKV6D-41A0A0C4DH26 115 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 MAGEB17A8MXT2 336 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 ANKRD66B4E2M5 251 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 TMEM178BH3BS89 294 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 SRSF10O75494 262 aaKnown RBP3.32□□□□□ -1.88
PTPN4-205ENST00000433888 PLA2G4BP0C869 781 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 UBA1P22314 1058 aaKnown RBP3.32□□□□□ -1.88
PTPN4-205ENST00000433888 CPOXP36551 454 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 BMXP51813 675 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 TBX2Q13207 712 aaPredicted RBP3.32□□□□□ -1.88
PTPN4-205ENST00000433888 CXorf66Q5JRM2 361 aaPredicted RBP3.32□□□□□ -1.88
PTPN4-205ENST00000433888 FFAR4Q5NUL3 377 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 AMER3Q8N944 861 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 RDM1Q8NG50 284 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 FGFBP3Q8TAT2 258 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 GMPPAQ96IJ6 420 aaPredicted RBP3.32□□□□□ -1.88
PTPN4-205ENST00000433888 SLX1AQ9BQ83 275 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 SYT11Q9BT88 431 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 MCRIP2Q9BUT9 160 aaKnown RBP3.32□□□□□ -1.88
PTPN4-205ENST00000433888 ZNF71Q9NQZ8 489 aaPredicted RBP3.32□□□□□ -1.88
PTPN4-205ENST00000433888 ATAD3AQ9NVI7 634 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 DNAJB4Q9UDY4 337 aa3.32□□□□□ -1.88
PTPN4-205ENST00000433888 LRRC53A6NM62 1247 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 SNAP23O00161 211 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 CLIC2O15247 247 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 SYNCRIPO60506 623 aaKnown RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 IFIT1P09914 478 aaKnown RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 FAM157CP0CG43 387 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 GATA2P23769 480 aaPredicted RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 PIP4K2AP48426 406 aaPredicted RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms