RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TMEM63AO94886 807 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 ZNF8P17098 575 aaPredicted RBP15.35■□□□□ 0.05
TREX1-201ENST00000433541 ACTR1BP42025 376 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 PTGIRP43119 386 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 RPIAP49247 311 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 ACTR1AP61163 376 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 TMEM115Q12893 351 aaPredicted RBP15.35■□□□□ 0.05
TREX1-201ENST00000433541 MSLNQ13421 630 aaPredicted RBP15.35■□□□□ 0.05
TREX1-201ENST00000433541 PEX6Q13608 980 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 PYCR3Q53H96 274 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 GPRC6AQ5T6X5 926 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 DET1Q7L5Y6 550 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 MAATS1Q7Z4T9 603 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 SNX20Q7Z614 316 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 ADGRG6Q86SQ4 1221 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 LRRTM4Q86VH4 590 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 SDR16C5Q8N3Y7 309 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 CCL4L1Q8NHW4 92 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 CDKN2AIPNLQ96HQ2 116 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 RMI1Q9H9A7 625 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 CHRAC1Q9NRG0 131 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 TRNAU1APQ9NX07 287 aaKnown RBP15.35■□□□□ 0.05
TREX1-201ENST00000433541 ANAPC5Q9UJX4 755 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 APOBEC2Q9Y235 224 aaKnown RBP15.35■□□□□ 0.05
TREX1-201ENST00000433541 NEU2Q9Y3R4 380 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 MAD1L1Q9Y6D9 718 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 PIKFYVEQ9Y2I7 2098 aa15.35■□□□□ 0.05
TREX1-201ENST00000433541 CPED1A4D0V7 1026 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 GPR89AB7ZAQ6 455 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 GAPDHSO14556 408 aaPredicted RBP15.34■□□□□ 0.05
TREX1-201ENST00000433541 TPP1O14773 563 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 NUAK1O60285 661 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 GPR89BP0CG08 455 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 AK4P27144 223 aaPredicted RBP15.34■□□□□ 0.05
TREX1-201ENST00000433541 PBLDP30039 288 aaPredicted RBP15.34■□□□□ 0.05
TREX1-201ENST00000433541 DUSP3P51452 185 aaPredicted RBP15.34■□□□□ 0.05
TREX1-201ENST00000433541 MRPS25P82663 173 aaKnown RBP15.34■□□□□ 0.05
TREX1-201ENST00000433541 CTBSQ01459 385 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 CACNG1Q06432 222 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 DNAJC3Q13217 504 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 WHAMMP3Q1A5X7 153 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 GPR33Q49SQ1 333 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 C6orf132Q5T0Z8 1188 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 AFTPHQ6ULP2 937 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 DDHD1Q8NEL9 900 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 HDAC10Q969S8 669 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 SNF8Q96H20 258 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 APOLD1Q96LR9 279 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 TTC1Q99614 292 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 COPS8Q99627 209 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 SMOXQ9NWM0 555 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 NCKIPSDQ9NZQ3 722 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 SLC2A6Q9UGQ3 507 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 KCNK6Q9Y257 313 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 DNAJC16Q9Y2G8 782 aa15.34■□□□□ 0.05
TREX1-201ENST00000433541 DNAH14Q0VDD8 3507 aa15.33■□□□□ 0.05
TREX1-201ENST00000433541 OR51F1A6NGY5 319 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 OR2AG2A6NM03 316 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 KMOO15229 486 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 SNX2O60749 519 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 DNAJC6O75061 913 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 CBFA2T3O75081 653 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 FUCA1P04066 466 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 FTH1P19P0C7X4 201 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 MLNP12872 115 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 MYF5P13349 255 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 CKMT2P17540 419 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 VCLP18206 1134 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 PAMP19021 973 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 MAGEA6P43360 314 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 PPM1FP49593 454 aaPredicted RBP15.33■□□□□ 0.04
TREX1-201ENST00000433541 ARSDP51689 593 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 XIAPP98170 497 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 CALCOCO2Q13137 446 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 LRP8Q14114 963 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 NR0B2Q15466 257 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 KHDC1Q4VXA5 237 aaKnown RBP15.33■□□□□ 0.04
TREX1-201ENST00000433541 FASTKD1Q53R41 847 aaKnown RBP15.33■□□□□ 0.04
TREX1-201ENST00000433541 FNBP1LQ5T0N5 605 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 RNASEH2BQ5TBB1 312 aaKnown RBP15.33■□□□□ 0.04
TREX1-201ENST00000433541 LVRNQ6Q4G3 990 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 ZNF534Q76KX8 674 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 NXPE1Q8N323 547 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 NAT8LQ8N9F0 302 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 MCUQ8NE86 351 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 MNS1Q8NEH6 495 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 DTX3LQ8TDB6 740 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 ZNF778Q96MU6 729 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 SERPINB12Q96P63 405 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 C19orf43Q9BQ61 176 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 DPH5Q9H2P9 285 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 SYNDIG1Q9H7V2 258 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 KLC4Q9NSK0 619 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 TAAR2Q9P1P5 351 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 FAM8A1Q9UBU6 413 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 TMPRSS11EQ9UL52 423 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 UTP11Q9Y3A2 253 aaKnown RBP15.33■□□□□ 0.04
TREX1-201ENST00000433541 PLEKHM1Q9Y4G2 1056 aa15.33■□□□□ 0.04
TREX1-201ENST00000433541 SPTBN2O15020 2390 aa15.32■□□□□ 0.04
TREX1-201ENST00000433541 CCDC162PA2VCL2 907 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms