RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 MFSD11O43934 449 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 MTA2O94776 668 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 SLC25A14O95258 325 aaPredicted RBP17.3■□□□□ 0.36
CNOT9-204ENST00000432877 NDUFA10O95299 355 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 FGF5P12034 268 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 SKILP12757 684 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 GFERP55789 205 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 MMRN1Q13201 1228 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 PDK2Q15119 407 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.3■□□□□ 0.36
CNOT9-204ENST00000432877 E4F1Q66K89 784 aaPredicted RBP17.3■□□□□ 0.36
CNOT9-204ENST00000432877 NCBP2-AS2Q69YL0 99 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 WASH2PQ6VEQ5 465 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 ASB18Q6ZVZ8 466 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 PRSS42Q7Z5A4 293 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 RASGRP3Q8IV61 690 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 TRIM48Q8IWZ4 208 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 KCTD6Q8NC69 237 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 ZDHHC12Q96GR4 267 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 FCRL4Q96PJ5 515 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 OR6C1Q96RD1 312 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 ZNF670Q9BS34 389 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 XPO4Q9C0E2 1151 aaKnown RBP17.3■□□□□ 0.36
CNOT9-204ENST00000432877 OR2AG1Q9H205 316 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 ZFYVE1Q9HBF4 777 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 WASH6PQ9NQA3 447 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 POT1Q9NUX5 634 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 OGFRQ9NZT2 677 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 EPHA6Q9UF33 1036 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 ANAPC7Q9UJX3 599 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 MRPS18BQ9Y676 258 aaKnown RBP17.3■□□□□ 0.36
CNOT9-204ENST00000432877 DOPEY2Q9Y3R5 2298 aa17.3■□□□□ 0.36
CNOT9-204ENST00000432877 RFPL1O75677 317 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 CYP1A2P05177 515 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 HLA-DQB2P05538 268 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 CD48P09326 243 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 SLC19A1P41440 591 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 PMS2P54278 862 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 DCDC1P59894 354 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 DPYSL3Q14195 570 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 ERV3-1Q14264 604 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 FIGNQ5HY92 759 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 ZNF569Q5MCW4 686 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 ATP1A1-AS1Q5TC04 95 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 ABRAXAS1Q6UWZ7 409 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 BPHLQ86WA6 291 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-204ENST00000432877 APLFQ8IW19 511 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-204ENST00000432877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.29■□□□□ 0.36
CNOT9-204ENST00000432877 TRAM1L1Q8N609 369 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 GALNT6Q8NCL4 622 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 KLHL6Q8WZ60 621 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 SYN2Q92777 582 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-204ENST00000432877 TGM7Q96PF1 710 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 BPIFA3Q9BQP9 254 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 TIMM29Q9BSF4 260 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 NUP85Q9BW27 656 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 SPATA16Q9BXB7 569 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 RAB33BQ9H082 229 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 OSGEPL1Q9H4B0 414 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 LRRC4CQ9HCJ2 640 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 NFKBIL1Q9UBC1 381 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-204ENST00000432877 SLC30A1Q9Y6M5 507 aa17.29■□□□□ 0.36
CNOT9-204ENST00000432877 ZFC3H1O60293 1989 aaKnown RBP17.29■□□□□ 0.36
CNOT9-204ENST00000432877 LRRK2Q5S007 2527 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 C21orf140B9A014 251 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 MTSS1O43312 755 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 VEGFDO43915 354 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 KATNA1O75449 491 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 SPAG6O75602 509 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 CREG1O75629 220 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 RASSF9O75901 435 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 KIAA0754O94854 1291 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 ZNF28P17035 718 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 ZNF7P17097 686 aaPredicted RBP17.28■□□□□ 0.36
CNOT9-204ENST00000432877 TYRP1P17643 537 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 SSR1P43307 286 aaKnown RBP17.28■□□□□ 0.36
CNOT9-204ENST00000432877 C4orf17Q53FE4 359 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 AGAP9Q5VTM2 703 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 ADGRG6Q86SQ4 1221 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 LRRTM4Q86VH4 590 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 PPP1R3BQ86XI6 285 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 HDAC11Q96DB2 347 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 BTBD6Q96KE9 485 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 SRPK1Q96SB4 655 aaKnown RBP17.28■□□□□ 0.36
CNOT9-204ENST00000432877 GPR87Q9BY21 358 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 THAP2Q9H0W7 228 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 MAGEE1Q9HCI5 957 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 SLC40A1Q9NP59 571 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 SCHIP1Q9P0W5 487 aaPredicted RBP17.28■□□□□ 0.36
CNOT9-204ENST00000432877 ZNF624Q9P2J8 865 aaPredicted RBP17.28■□□□□ 0.36
CNOT9-204ENST00000432877 TLK1Q9UKI8 766 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 RELNP78509 3460 aa17.28■□□□□ 0.36
CNOT9-204ENST00000432877 PIPSLA2A3N6 862 aa17.27■□□□□ 0.36
CNOT9-204ENST00000432877 KCNJ13O60928 360 aa17.27■□□□□ 0.36
CNOT9-204ENST00000432877 JCHAINP01591 159 aa17.27■□□□□ 0.36
CNOT9-204ENST00000432877 IDSP22304 550 aa17.27■□□□□ 0.36
CNOT9-204ENST00000432877 CD86P42081 329 aa17.27■□□□□ 0.36
CNOT9-204ENST00000432877 CAPZBP47756 277 aa17.27■□□□□ 0.36
CNOT9-204ENST00000432877 SEPHS1P49903 392 aa17.27■□□□□ 0.36
CNOT9-204ENST00000432877 SH3BP2P78314 561 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms