RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 GSSP48637 474 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 PPIDQ08752 370 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 PTP4A2Q12974 167 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 ALG11Q2TAA5 492 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 R3HCC1LQ7Z5L2 792 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 DENND6AQ8IWF6 608 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 CLHC1Q8NHS4 586 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 AENQ8WTP8 325 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 NXNL1Q96CM4 212 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 TSSK3Q96PN8 268 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 ZNF490Q9ULM2 529 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 SLC25A12O75746 678 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 CALB2P22676 271 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 DRG2P55039 364 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 SCUBE1Q8IWY4 988 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 PIWIL2Q8TC59 973 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 ZSCAN5AQ9BUG6 496 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 XYLT2Q9H1B5 865 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 LRRC4CQ9HCJ2 640 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 ACSS2Q9NR19 701 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 HCFC1R1Q9NWW0 138 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 SALL4Q9UJQ4 1053 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 FBXW2Q9UKT8 454 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 SLX4Q8IY92 1834 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 ERN1O75460 977 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 TCF4P15884 667 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 SERPINB3P29508 390 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 NOVP48745 357 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 NAA20P61599 178 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 FAM98BQ52LJ0 330 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 NCBP2-AS2Q69YL0 99 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 FAM43BQ6ZT52 329 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 PGM2Q96G03 612 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 OXNAD1Q96HP4 312 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 PANX1Q96RD7 426 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 KLHL20Q9Y2M5 609 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 COQ6Q9Y2Z9 468 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 ABHD2P08910 425 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 BUD31P41223 144 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 GDF10P55107 478 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 TXNRD3NBQ6F5E7 133 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 C10orf107Q8IVU9 208 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 TTC9BQ8N6N2 239 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 FCRL5Q96RD9 977 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 PRRG3Q9BZD7 231 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 C8orf33Q9H7E9 229 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 CDH7Q9ULB5 785 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 ACTL7BQ9Y614 415 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 KAT6AQ92794 2004 aa16.95■□□□□ 0.3
SMARCA4-203ENST00000429416 CSTF2P33240 577 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 POLE2P56282 527 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 CHRNA6Q15825 494 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 MRPL10Q7Z7H8 261 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 C14orf80Q86SX3 495 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 GKN2Q86XP6 184 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 GAL3ST4Q96RP7 486 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 UBR2Q8IWV8 1755 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 KDELR3O43731 214 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 OAZ2O95190 189 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 NUP107P57740 925 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 SRSF11Q05519 484 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 LMAN2Q12907 356 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 LRRC66Q68CR7 880 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 SCAIQ8N9R8 606 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 NCSTNQ92542 709 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 NPY6RQ99463 290 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 IPPKQ9H8X2 491 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 CCDC162PA2VCL2 907 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 H3BNH8 94 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 DSG1Q02413 1049 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 GPRIN1Q7Z2K8 1008 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 TMEM130Q8N3G9 435 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 RBM18Q96H35 190 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 WDR6Q9NNW5 1121 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 LEFTY1O75610 366 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 MATN4O95460 622 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 VAV1P15498 845 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 TBCELQ5QJ74 424 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 CYP2R1Q6VVX0 501 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 GCNT7Q6ZNI0 430 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 JSRP1Q96MG2 331 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 C3orf14Q9HBI5 128 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 MRPS30Q9NP92 439 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 HCSTQ9UBK5 93 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 ZNF598Q86UK7 904 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 FAM20CQ8IXL6 584 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 TRIM4Q9C037 500 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 PDLIM7Q9NR12 457 aa16.94■□□□□ 0.3
SMARCA4-203ENST00000429416 PRMT3O60678 531 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 CHIT1Q13231 466 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 LSM12Q3MHD2 195 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 UNC5BQ8IZJ1 945 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 FBXO15Q8NCQ5 510 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 ANKRD7Q92527 254 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 CASD1Q96PB1 797 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 TCF12Q99081 682 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 POLR1BQ9H9Y6 1135 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 RXFP1Q9HBX9 757 aa16.93■□□□□ 0.3
SMARCA4-203ENST00000429416 DDX18Q9NVP1 670 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms