RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ZFAND1Q8TCF1 268 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 GIMAP1Q8WWP7 306 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 TMCO6Q96DC7 493 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 C19orf60Q96EN9 201 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 CSPG4P5Q96PW8 444 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 TRMOQ9BU70 441 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 XYLT2Q9H1B5 865 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 FBRSL1Q9HCM7 1045 aaKnown RBP15.98■□□□□ 0.15
C9orf3-206ENST00000428313 ITM2CQ9NQX7 267 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 FAM49BQ9NUQ9 324 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 MAGEL2Q9UJ55 1249 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 PNMA8BQ9ULN7 279 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-206ENST00000428313 POLHQ9Y253 713 aa15.98■□□□□ 0.15
C9orf3-206ENST00000428313 BTAF1O14981 1849 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 NOS1APO75052 506 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 ANGPTL1O95841 491 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 CHRM3P20309 590 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 SAT1P21673 171 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 MASP1P48740 699 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 YBX1P67809 324 aaKnown RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 UGP2Q16851 508 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 FAM98BQ52LJ0 330 aaKnown RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 ZC3H12BQ5HYM0 836 aaKnown RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 ARHGEF16Q5VV41 709 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 SLC41A1Q8IVJ1 513 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 GALNT6Q8NCL4 622 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 CHURC1Q8WUH1 139 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 GTF2H4Q92759 462 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 RPL3LQ92901 407 aaKnown RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 RPL10LQ96L21 214 aaKnown RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 ACAD9Q9H845 621 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 CCNB1IP1Q9NPC3 277 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 SLC52A3Q9NQ40 469 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 C3orf18Q9UK00 162 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 MAGED1Q9Y5V3 778 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 ENPP3O14638 875 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 SLITRK5O94991 958 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 AP2A1O95782 977 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 GOT2P00505 430 aaKnown RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 CD36P16671 472 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 FMO4P31512 558 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 MTHFRP42898 656 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 FCGRTP55899 365 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 SURF1Q15526 300 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 SULT1C3Q6IMI6 304 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 PRR5LQ6MZQ0 368 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 APOBEC3HQ6NTF7 200 aaKnown RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 PLCZ1Q86YW0 608 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 SNAPC3Q92966 411 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 P2RY11Q96G91 374 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 PGLYRP2Q96PD5 576 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 LGMNQ99538 433 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 ACAT2Q9BWD1 397 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 BCO2Q9BYV7 579 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 COL20A1Q9P218 1284 aa15.97■□□□□ 0.15
C9orf3-206ENST00000428313 SCAF8Q9UPN6 1271 aaKnown RBP15.97■□□□□ 0.15
C9orf3-206ENST00000428313 LY75O60449 1722 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 PRMT5O14744 637 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-206ENST00000428313 XPNPEP2O43895 674 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 SSX4O60224 188 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 IPO13O94829 963 aaKnown RBP15.96■□□□□ 0.15
C9orf3-206ENST00000428313 STMN1P16949 149 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 ERP29P30040 261 aaKnown RBP15.96■□□□□ 0.15
C9orf3-206ENST00000428313 CLK1P49759 484 aaKnown RBP15.96■□□□□ 0.15
C9orf3-206ENST00000428313 NFYCQ13952 458 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 DGCR6Q14129 220 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 FAM83EQ2M2I3 478 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 RFX4Q33E94 735 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 TRAPPC3LQ5T215 181 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 BLOC1S3Q6QNY0 202 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 UBE2Q1Q7Z7E8 422 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 PSTKQ8IV42 348 aaKnown RBP15.96■□□□□ 0.15
C9orf3-206ENST00000428313 SETD9Q8NE22 299 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 SLC38A4Q969I6 547 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 C1QTNF7Q9BXJ2 289 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 TEX13BQ9BXU2 312 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 UGT2B28Q9BY64 529 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 AKTIPQ9H8T0 292 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 SMURF2Q9HAU4 748 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 ACOT13Q9NPJ3 140 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 SCN3BQ9NY72 215 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 DNAJB9Q9UBS3 223 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 FBXO40Q9UH90 709 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 PCDHA10Q9Y5I2 948 aa15.96■□□□□ 0.15
C9orf3-206ENST00000428313 DOCK5Q9H7D0 1870 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 DDTLA6NHG4 134 aaPredicted RBP15.96■□□□□ 0.14
C9orf3-206ENST00000428313 A8MV72 311 aaPredicted RBP15.96■□□□□ 0.14
C9orf3-206ENST00000428313 H3BMM5 538 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 K7ERI5 159 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 ARHGEF9O43307 516 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 UGT2B17O75795 530 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 EGFRP00533 1210 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 GH2P01242 217 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 NPY2RP49146 381 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 SERPINH1P50454 418 aaKnown RBP15.96■□□□□ 0.14
C9orf3-206ENST00000428313 UGT2B15P54855 530 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 LRRC26Q2I0M4 334 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 RABL3Q5HYI8 236 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 DENND5AQ6IQ26 1287 aa15.96■□□□□ 0.14
C9orf3-206ENST00000428313 NT5DC4Q86YG4 428 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms