RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 PRPF4BQ13523 1007 aaKnown RBP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 TNFAIP1Q13829 316 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 OASLQ15646 514 aaKnown RBP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 DLG2Q15700 870 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 MEP1AQ16819 746 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 CCDC96Q2M329 555 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 SOWAHCQ53LP3 525 aaPredicted RBP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 IGSF11Q5DX21 431 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 NSUN5P2Q63ZY6 315 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 GPR139Q6DWJ6 353 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 FAM122CQ6P4D5 195 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 OR8H2Q8N162 312 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 MAGEC3Q8TD91 643 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 UTP15Q8TED0 518 aaKnown RBP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 TRPC4APQ8TEL6 797 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 DUSP19Q8WTR2 217 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 TAAR8Q969N4 342 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 RTP4Q96DX8 246 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 SCMH1Q96GD3 660 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 TMEM19Q96HH6 336 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 FAM84BQ96KN1 310 aaPredicted RBP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 CEP295NLQ96MC4 621 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 DDOQ99489 341 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 SLF1Q9BQI6 1058 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 KIFC3Q9BVG8 833 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 TMEM39BQ9GZU3 492 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 OSGEPL1Q9H4B0 414 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 RAD21L1Q9H4I0 556 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 PLSCR4Q9NRQ2 329 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 GIMAP4Q9NUV9 329 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 PAG1Q9NWQ8 432 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 TAS2R14Q9NYV8 317 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 SMARCAL1Q9NZC9 954 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 ZNF224Q9NZL3 707 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 C1RLQ9NZP8 487 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 SEC63Q9UGP8 760 aaKnown RBP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 SIX4Q9UIU6 781 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 ACSL5Q9ULC5 683 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 KCNS2Q9ULS6 477 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 PPIEQ9UNP9 301 aaKnown RBP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 EXO1Q9UQ84 846 aaKnown RBP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 VDAC3Q9Y277 283 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 TTLL3Q9Y4R7 772 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 MAGED1Q9Y5V3 778 aaPredicted RBP2.41□□□□□ -2.02
PTPRC-208ENST00000427110 PTPRCP08575 1304 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 SCN5AQ14524 2016 aa2.41□□□□□ -2.02
PTPRC-208ENST00000427110 ZCCHC6Q5VYS8 1495 aaKnown RBP2.4□□□□□ -2.02
PTPRC-208ENST00000427110 PLSCR5A0PG75 271 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 OR2A25A4D2G3 310 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 CLEC18AA5D8T8 446 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 SYNDIG1LA6NDD5 238 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 CLGNO14967 610 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 SMAD9O15198 467 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 MID1O15344 667 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 P4HA2O15460 535 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 KCNN4O15554 427 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 TIMM44O43615 452 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 PLPP2O43688 288 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 AVILO75366 819 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 ERAL1O75616 437 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 RSL1D1O76021 490 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 ZBTB11O95625 1053 aaPredicted RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 PPP1R3DO95685 299 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 PMS2P2O95744 297 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 GH2P01242 217 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF12P17014 697 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 GJA1P17302 382 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 POLR2CP19387 275 aaPredicted RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 CORO1AP31146 461 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 APOBEC1P41238 236 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 FASLGP48023 281 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 CLDN20P56880 219 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 KRTAP10-7P60409 375 aaPredicted RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 SEC61A1P61619 476 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 TUBA1BP68363 451 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 IFI35P80217 286 aaPredicted RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 COG7P83436 770 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF155Q12901 538 aaPredicted RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 SNTA1Q13424 505 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 BECN1Q14457 450 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 SF3B4Q15427 424 aaKnown RBP eCLIP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 DECR1Q16698 335 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 TMEM266Q2M3C6 531 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 MYLK3Q32MK0 819 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 RARS2Q5T160 578 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 ZDHHC20Q5W0Z9 365 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 C18orf63Q68DL7 685 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 PAPD4Q6PIY7 484 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 C16orf54Q6UWD8 224 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 ARMC9Q7Z3E5 817 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 TSPAN33Q86UF1 283 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 AACSQ86V21 672 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 SFR1Q86XK3 245 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 NRROSQ86YC3 692 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 CHERPQ8IWX8 916 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 ODF3L1Q8IXM7 274 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF34Q8IZ26 560 aa2.4□□□□□ -2.03
PTPRC-208ENST00000427110 RNF113BQ8IZP6 322 aaKnown RBP2.4□□□□□ -2.03
PTPRC-208ENST00000427110 SCML4Q8N228 414 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms