RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 CYP2S1Q96SQ9 504 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 OR2AG1Q9H205 316 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 IPPKQ9H8X2 491 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 GTF2A1LQ9UNN4 478 aa13.77□□□□□ -0.2
RPL28-202ENST00000426763 RFXANKO14593 260 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 SLC22A3O75751 556 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 OR6A2O95222 327 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 LRATO95237 230 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 IL5RAQ01344 420 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 ZNF33AQ06730 810 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 TOMM20Q15388 145 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 TRIM40Q6P9F5 258 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 DDX1Q92499 740 aaKnown RBP13.77□□□□□ -0.21
RPL28-202ENST00000426763 OR52E6Q96RD3 313 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 PCBD2Q9H0N5 130 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 PSMD13Q9UNM6 376 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 COL18A1P39060 1754 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.21
RPL28-202ENST00000426763 CCNFP41002 786 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 ZNF132P52740 706 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 PNLIPRP1P54315 467 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 ITPRIPL2Q3MIP1 535 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 SLC9A4Q6AI14 798 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 MRPL10Q7Z7H8 261 aaKnown RBP13.77□□□□□ -0.21
RPL28-202ENST00000426763 STK32CQ86UX6 486 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 AMZ2Q86W34 360 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 DENND6AQ8IWF6 608 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 ZNF276Q8N554 614 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 C3orf14Q9HBI5 128 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 PDLIM7Q9NR12 457 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 KLHL3Q9UH77 587 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 H3BN98 237 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 COCHO43405 550 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 CNOT3O75175 753 aaKnown RBP13.77□□□□□ -0.21
RPL28-202ENST00000426763 RB1P06400 928 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 HSPA7P48741 367 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 LY6G5CQ5SRR4 150 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 CPNE9Q8IYJ1 553 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 DNAJB14Q8TBM8 379 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 TMEM109Q9BVC6 243 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 LRTM1Q9HBL6 345 aa13.77□□□□□ -0.21
RPL28-202ENST00000426763 CCDC162PA2VCL2 907 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 MAGEA13PA6NCF6 341 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 VIPR1P32241 457 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 GALNT2Q10471 571 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 TDRPQ86YL5 185 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 ADHFE1Q8IWW8 467 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 LMO3Q8TAP4 145 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 FBXO30Q8TB52 745 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 C9orf16Q9BUW7 83 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 SLCO1B3Q9NPD5 702 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 USE1Q9NZ43 259 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 MPSTP25325 297 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 SLC1A2P43004 574 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 NCF4Q15080 339 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 EML3Q32P44 896 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 CCNYL2Q5T2Q4 361 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 MED27Q6P2C8 311 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 IZUMO2Q6UXV1 221 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 GATAD2AQ86YP4 633 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 C1orf74Q96LT6 269 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 SLC38A3Q99624 504 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 ZSCAN5AQ9BUG6 496 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 EBF3Q9H4W6 596 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 NOL11Q9H8H0 719 aaKnown RBP13.76□□□□□ -0.21
RPL28-202ENST00000426763 ATP6V1B1P15313 513 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 PROZP22891 400 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 BMPR1AP36894 532 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.76□□□□□ -0.21
RPL28-202ENST00000426763 CPTPQ5TA50 214 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 C22orf39Q6P5X5 142 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 ZDHHC13Q8IUH4 622 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 SMG9Q9H0W8 520 aaKnown RBP13.76□□□□□ -0.21
RPL28-202ENST00000426763 SEMA3GQ9NS98 782 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 GRHL1Q9NZI5 618 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 HNRNPH1P31943 449 aaKnown RBP13.76□□□□□ -0.21
RPL28-202ENST00000426763 ASMTP46597 345 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 LCP2Q13094 533 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 GRM2Q14416 872 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 SLC1A5Q15758 541 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 ADRM1Q16186 407 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 SIRPB2Q5JXA9 342 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 OR13C4Q8NGS5 318 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 OR10T2Q8NGX3 314 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 C19orf60Q96EN9 201 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 APOLD1Q96LR9 279 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 RAB11FIP5Q9BXF6 653 aa13.76□□□□□ -0.21
RPL28-202ENST00000426763 TMEM63AO94886 807 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 VAV1P15498 845 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 MANFP55145 182 aaKnown RBP13.75□□□□□ -0.21
RPL28-202ENST00000426763 SEMG2Q02383 582 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 CLCQ05315 142 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 RING1Q06587 406 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 GTF2H2Q13888 395 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 GTF2H2CQ6P1K8 395 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 APOL4Q9BPW4 351 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 SSU72Q9NP77 194 aaKnown RBP13.75□□□□□ -0.21
RPL28-202ENST00000426763 ZDHHC3Q9NYG2 299 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 MTRRQ9UBK8 725 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms