RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 TBC1D13Q9NVG8 400 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 KIAA0100Q14667 2235 aaKnown RBP13.28□□□□□ -0.28
USP42-203ENST00000426246 H6PDO95479 791 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ZNF682O95780 498 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 LBPP18428 481 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 DGKEP52429 567 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 RHDQ02161 417 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ARHGEF7Q14155 803 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 SEMA3AQ14563 771 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 CPSF6Q16630 551 aaKnown RBP eCLIP13.28□□□□□ -0.28
USP42-203ENST00000426246 FAM151BQ6UXP7 276 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ISCA2Q86U28 154 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 CARNMT1Q8N4J0 409 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 SGCDQ92629 289 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 MYEOVQ96EZ4 313 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 LINGO1Q96FE5 620 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 FCRL5Q96RD9 977 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ACBD6Q9BR61 282 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ADI1Q9BV57 179 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ZYG11BQ9C0D3 744 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 POLR3HQ9Y535 204 aaPredicted RBP13.28□□□□□ -0.28
USP42-203ENST00000426246 A0A087X1B8 175 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ABCB1P08183 1280 aaPredicted RBP13.28□□□□□ -0.28
USP42-203ENST00000426246 ZNF182P17025 639 aaPredicted RBP13.28□□□□□ -0.28
USP42-203ENST00000426246 RPL38P63173 70 aaKnown RBP13.28□□□□□ -0.28
USP42-203ENST00000426246 ITGADQ13349 1161 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 UNC50Q53HI1 259 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ATXN7L2Q5T6C5 722 aaPredicted RBP13.28□□□□□ -0.28
USP42-203ENST00000426246 SCD5Q86SK9 330 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 RDH11Q8TC12 318 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 VWCEQ96DN2 955 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 RERGLQ9H628 205 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ATXN10Q9UBB4 475 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 KLQ9UEF7 1012 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 PITPNM1O00562 1244 aa13.27□□□□□ -0.28
USP42-203ENST00000426246 BMP1P13497 986 aa13.27□□□□□ -0.28
USP42-203ENST00000426246 ARCN1P48444 511 aaKnown RBP13.27□□□□□ -0.28
USP42-203ENST00000426246 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.28
USP42-203ENST00000426246 PAGE3Q5JUK9 113 aa13.27□□□□□ -0.28
USP42-203ENST00000426246 TIGD7Q6NT04 549 aaPredicted RBP13.27□□□□□ -0.28
USP42-203ENST00000426246 RTL3Q8N8U3 475 aaKnown RBP13.27□□□□□ -0.28
USP42-203ENST00000426246 MYOCQ99972 504 aa13.27□□□□□ -0.28
USP42-203ENST00000426246 SEZ6LQ9BYH1 1024 aa13.27□□□□□ -0.28
USP42-203ENST00000426246 SMURF2Q9HAU4 748 aa13.27□□□□□ -0.28
USP42-203ENST00000426246 RBMX2Q9Y388 322 aaKnown RBP13.27□□□□□ -0.28
USP42-203ENST00000426246 ARPC2O15144 300 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 MUSKO15146 869 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 HS6ST1O60243 411 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 RSL1D1O76021 490 aaKnown RBP13.27□□□□□ -0.29
USP42-203ENST00000426246 ALPIP09923 528 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 UGT1A1P22309 533 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 UGT1A4P22310 534 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 AQP1P29972 269 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 UGT1A3P35503 534 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 UGT1A5P35504 534 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 HSPA7P48741 367 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 PRKAA2P54646 552 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 RAD51Q06609 339 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 TMTC4Q5T4D3 741 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 PRSS55Q6UWB4 352 aaPredicted RBP13.27□□□□□ -0.29
USP42-203ENST00000426246 SLC15A3Q8IY34 581 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 TMEM151AQ8N4L1 468 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 GIPC3Q8TF64 312 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 EEF1AKMT1Q8WVE0 214 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 FAM162AQ96A26 154 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 NTAN1Q96AB6 310 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 TCF12Q99081 682 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 CXorf21Q9HAI6 301 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 TLR9Q9NR96 1032 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 GID8Q9NWU2 228 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 RAB26Q9ULW5 256 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 LINC00854A0A1B0GVQ3 168 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 TMEM189-UBE2V1I3L0A0 370 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 SNAP91O60641 907 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 PTGR1Q14914 329 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 PGS1Q32NB8 556 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 FAM91A1Q658Y4 838 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 GRAMD4Q6IC98 578 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 PHACTR4Q8IZ21 702 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 C2CD4AQ8NCU7 369 aaPredicted RBP13.27□□□□□ -0.29
USP42-203ENST00000426246 OR13J1Q8NGT2 312 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 PYCR2Q96C36 320 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 GPR78Q96P69 363 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 CLK4Q9HAZ1 481 aaKnown RBP13.27□□□□□ -0.29
USP42-203ENST00000426246 AMBNQ9NP70 447 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 TAS2R13Q9NYV9 303 aa13.27□□□□□ -0.29
USP42-203ENST00000426246 SYCE1LA8MT33 242 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 LDLRP01130 860 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 CLCN5P51795 746 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 SIM2Q14190 667 aaPredicted RBP13.26□□□□□ -0.29
USP42-203ENST00000426246 FGD3Q5JSP0 725 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 STXBP5Q5T5C0 1151 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 RANBP10Q6VN20 620 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 MBOAT1Q6ZNC8 495 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 FUNDC1Q8IVP5 155 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 CMTR2Q8IYT2 770 aaKnown RBP13.26□□□□□ -0.29
USP42-203ENST00000426246 DBF4BQ8NFT6 615 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 NSMCE2Q96MF7 247 aa13.26□□□□□ -0.29
USP42-203ENST00000426246 POLR1EQ9GZS1 481 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms