RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 USP27XA6NNY8 438 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ERI2A8K979 691 aaKnown RBP22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CSO75390 466 aaKnown RBP22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CDK14O94921 469 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CA5AP35218 305 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 KCNJ1P48048 391 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 BIRC2Q13490 618 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 SEMA5AQ13591 1074 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 SPIDRQ14159 915 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 GSE1Q14687 1217 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ST3GAL2Q16842 350 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 INSCQ1MX18 579 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 PPP1R21Q6ZMI0 780 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 RBM44Q6ZP01 1051 aaKnown RBP22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 LRRTM4Q86VH4 590 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CCNJLQ8IV13 435 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 PRELID2Q8N945 189 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 Q8N9G6 341 aaPredicted RBP22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 DDHD1Q8NEL9 900 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 OR52K1Q8NGK4 314 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 WDR48Q8TAF3 677 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 MS4A14Q96JA4 679 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 TTC25Q96NG3 672 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ZCCHC2Q9C0B9 1178 aaKnown RBP22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 HOMER3Q9NSC5 361 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 DRG1Q9Y295 367 aaKnown RBP22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 PCDHB1Q9Y5F3 818 aa22.05■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CCL22O00626 93 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CHUKO15111 745 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 LDB2O43679 373 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 NUDT21O43809 227 aaKnown RBP22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 TCEA3O75764 348 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 RPLP0P05388 317 aaKnown RBP22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 AKT1P31749 480 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 RPL22P35268 128 aaKnown RBP22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CCL7P80098 99 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 LDLRAP1Q5SW96 308 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 GPRC6AQ5T6X5 926 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 C17orf82Q86X59 251 aaPredicted RBP22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 TRAPPC5Q8IUR0 188 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 RASGEF1CQ8N431 466 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ARL14Q8N4G2 192 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 DNAAF3Q8N9W5 541 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 MDM1Q8TC05 714 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ZNF398Q8TD17 642 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 NXPE2Q96DL1 559 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 DNAJC1Q96KC8 554 aaKnown RBP22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 OSGEPL1Q9H4B0 414 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CCDC86Q9H6F5 360 aaKnown RBP22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 SMOXQ9NWM0 555 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 APPL1Q9UKG1 709 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 PYCARDQ9ULZ3 195 aa22.04■■□□□ 1.12
PTCHD3P2-201ENST00000424937 PIKFYVEQ9Y2I7 2098 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 RHPN2P1A8MT19 583 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 KMOO15229 486 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 SNX2O60749 519 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 SRP72O76094 671 aaKnown RBP22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 EML2O95834 649 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 APRTP07741 180 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 PNLIPP16233 465 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 HADHAP40939 763 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CDH17Q12864 832 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 TMEM115Q12893 351 aaPredicted RBP22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 SPRED1Q7Z699 444 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 GFM1Q96RP9 751 aaKnown RBP22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 OSBPL9Q96SU4 736 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ASB8Q9H765 288 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 KLC4Q9NSK0 619 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 SMARCAL1Q9NZC9 954 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 TBC1D29Q9UFV1 150 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ASPMQ8IZT6 3477 aa22.03■■□□□ 1.12
PTCHD3P2-201ENST00000424937 TRBV23OR9-2A0A075B6M9 112 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CCDC78A2IDD5 438 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 PGRMC1O00264 195 aaKnown RBP22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 NTN3O00634 580 aaPredicted RBP22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 SUN1O94901 812 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 GAS8O95995 478 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ZNF7P17097 686 aaPredicted RBP22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 BASP1P80723 227 aaKnown RBP22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 XIAPP98170 497 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 NFATC2Q13469 925 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 KCTD19Q17RG1 926 aaPredicted RBP22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ISXQ2M1V0 245 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 ZNF547Q8IVP9 402 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 KDF1Q8NAX2 398 aaPredicted RBP22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 SLC37A2Q8TED4 501 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 COG1Q8WTW3 980 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 TIMM29Q9BSF4 260 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 AP1M1Q9BXS5 423 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 LRRN3Q9H3W5 708 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 CRLS1Q9UJA2 301 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 DNAJC16Q9Y2G8 782 aa22.02■■□□□ 1.12
PTCHD3P2-201ENST00000424937 A0A1W2PQM1 296 aa22.01■■□□□ 1.11
PTCHD3P2-201ENST00000424937 D6RAR5 112 aa22.01■■□□□ 1.11
PTCHD3P2-201ENST00000424937 ITGALP20701 1170 aa22.01■■□□□ 1.11
PTCHD3P2-201ENST00000424937 GRIA1P42261 906 aa22.01■■□□□ 1.11
PTCHD3P2-201ENST00000424937 ZNF438Q7Z4V0 828 aa22.01■■□□□ 1.11
PTCHD3P2-201ENST00000424937 SFRP1Q8N474 314 aa22.01■■□□□ 1.11
PTCHD3P2-201ENST00000424937 RASGEF1AQ8N9B8 481 aa22.01■■□□□ 1.11
PTCHD3P2-201ENST00000424937 NAP1L3Q99457 506 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms