RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 SLC30A9Q6PML9 568 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 TMPRSS11BQ86T26 416 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 AMZ2Q86W34 360 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 TDHQ8IZJ6 230 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 KIF2BQ8N4N8 673 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 FGF13Q92913 245 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 SLC22A12Q96S37 553 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 CCDC90BQ9GZT6 254 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 LMAN2LQ9H0V9 348 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 CCDC167Q9P0B6 97 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 SLC17A6Q9P2U8 582 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF711Q9Y462 761 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 COLEC10Q9Y6Z7 277 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 OR51F1A6NGY5 319 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 TNFRSF10BO14763 440 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 KDELR3O43731 214 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 GABBR2O75899 941 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 RPSAP08865 295 aaKnown RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 THRAP10827 490 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 PPP2R1BP30154 601 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 PRKAA2P54646 552 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 AP2B1P63010 937 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 MAD2L1Q13257 205 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 MSLNQ13421 630 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 PRKD1Q15139 912 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 PTCD2Q8WV60 388 aaKnown RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 C12orf66Q96MD2 445 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 MRPL57Q9BQC6 102 aaKnown RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 CHCHD3Q9NX63 227 aaKnown RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 CYP8B1Q9UNU6 501 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 MYO18AQ92614 2054 aaKnown RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 SPTA1P02549 2419 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 GVINP1Q7Z2Y8 2422 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 MAN2B1O00754 1011 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 TULP3O75386 442 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 CLDN7O95471 211 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 HNRNPLP14866 589 aaKnown RBP eCLIP9.67□□□□□ -0.869e-8■■□□□ 11.7
CMSS1-201ENST00000421999 ITGB8P26012 769 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 NSG1P42857 185 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 RGS1Q08116 209 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 NAPRTQ6XQN6 538 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF621Q6ZSS3 439 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 CLEC4FQ8N1N0 589 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 TRIML2Q8N7C3 387 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 DCBLD1Q8N8Z6 715 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 TXNDC5Q8NBS9 432 aaKnown RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 FAM120BQ96EK7 910 aaKnown RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 ASB2Q96Q27 587 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 TMEM120AQ9BXJ8 343 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 OSBPL1AQ9BXW6 950 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 C12orf65Q9H3J6 166 aaKnown RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 MAFFQ9ULX9 164 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 UPK3BL1B0FP48 263 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 UPK3BL2E5RIL1 263 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 OR10H2O60403 315 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 MAFKO60675 156 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 CD72P21854 359 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 RPIAP49247 311 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 FOXM1Q08050 763 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 SLC1A5Q15758 541 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 LRRC36Q1X8D7 754 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 ATAD3BQ5T9A4 648 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF852Q6ZMS4 543 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 DPY19L3Q6ZPD9 716 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 SETD7Q8WTS6 366 aaKnown RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 HLA-CQ95604 372 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 GFM2Q969S9 779 aaKnown RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 NSL1Q96IY1 281 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 PLEKHA8Q96JA3 519 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 TSGA13Q96PP4 275 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 TPSD1Q9BZJ3 242 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF556Q9HAH1 456 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 STOML1Q9UBI4 398 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 A0A1W2PP55 124 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 ANKRD66B4E2M5 251 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 SGTAO43765 313 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 S100A3P33764 101 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 PGFP49763 221 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 CCR4P51679 360 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 TOMM20Q15388 145 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 PPM1JQ5JR12 505 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 SIRPB2Q5JXA9 342 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 Q6ZVL8 140 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 PIWIL4Q7Z3Z4 852 aaKnown RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 CPNE9Q8IYJ1 553 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 ZBTB2Q8N680 514 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 PIGKQ92643 395 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 OXNAD1Q96HP4 312 aaPredicted RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 NAF1Q96HR8 494 aaKnown RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 LMLNQ96KR4 655 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 FAF1Q9UNN5 650 aaPredicted RBP9.66□□□□□ -0.86
CMSS1-201ENST00000421999 ASXL3Q9C0F0 2248 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 SCN1AP35498 2009 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 UTRNP46939 3433 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 B4DGG1 531 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 H0YGN5 161 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 K7ERQ8 282 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 AGPSO00116 658 aa9.66□□□□□ -0.86
CMSS1-201ENST00000421999 TARSP26639 723 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms