RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 ALKBH8Q96BT7 664 aaKnown RBP21.32■■□□□ 1
ABCF3-202ENST00000421340 DCUN1D1Q96GG9 259 aa21.32■■□□□ 1
ABCF3-202ENST00000421340 COX14Q96I36 57 aa21.32■■□□□ 1
ABCF3-202ENST00000421340 CABS1Q96KC9 395 aa21.32■■□□□ 1
ABCF3-202ENST00000421340 SPACA7Q96KW9 195 aa21.32■■□□□ 1
ABCF3-202ENST00000421340 EPHX3Q9H6B9 360 aa21.32■■□□□ 1
ABCF3-202ENST00000421340 POPDC3Q9HBV1 291 aa21.32■■□□□ 1
ABCF3-202ENST00000421340 TRIM39Q9HCM9 518 aa21.32■■□□□ 1
ABCF3-202ENST00000421340 SSU72Q9NP77 194 aaKnown RBP21.32■■□□□ 1
ABCF3-202ENST00000421340 MBNL1Q9NR56 388 aaKnown RBP21.32■■□□□ 1
ABCF3-202ENST00000421340 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.32■■□□□ 1
ABCF3-202ENST00000421340 GNPTGQ9UJJ9 305 aa21.32■■□□□ 1
ABCF3-202ENST00000421340 A0A1W2PPM1 405 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 UBA6A0AVT1 1052 aaPredicted RBP21.31■■□□□ 1
ABCF3-202ENST00000421340 QSOX1O00391 747 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 LAMTOR5O43504 91 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 ALDOAP04075 364 aaKnown RBP21.31■■□□□ 1
ABCF3-202ENST00000421340 MPOP05164 745 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 IGHV4-34P06331 123 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 F7P08709 466 aaPredicted RBP21.31■■□□□ 1
ABCF3-202ENST00000421340 TDGF1P13385 188 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 ATP1B2P14415 290 aaPredicted RBP21.31■■□□□ 1
ABCF3-202ENST00000421340 MSH3P20585 1137 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 HNRNPA2B1P22626 353 aaKnown RBP21.31■■□□□ 1
ABCF3-202ENST00000421340 SLC18A2Q05940 514 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 USP10Q14694 798 aaKnown RBP21.31■■□□□ 1
ABCF3-202ENST00000421340 ZKSCAN8Q15776 578 aaPredicted RBP21.31■■□□□ 1
ABCF3-202ENST00000421340 TMEM31Q5JXX7 168 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 C1orf210Q8IVY1 113 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 PELI3Q8N2H9 469 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 GPATCH11Q8N954 259 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 PLA2G15Q8NCC3 412 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 GDAP1Q8TB36 358 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 KCNJ9Q92806 393 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 ZBTB9Q96C00 473 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 ATXN7L3BQ96GX2 97 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 ELMO2Q96JJ3 720 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 GPR174Q9BXC1 333 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 ZCCHC2Q9C0B9 1178 aaKnown RBP21.31■■□□□ 1
ABCF3-202ENST00000421340 C6orf106Q9H6K1 298 aaPredicted RBP21.31■■□□□ 1
ABCF3-202ENST00000421340 SLC39A10Q9ULF5 831 aa21.31■■□□□ 1
ABCF3-202ENST00000421340 PLXNA2O75051 1894 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 SLC31A1O15431 190 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 VEGFDO43915 354 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 NDUFS2O75306 463 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 PCCBP05166 539 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 STMN1P16949 149 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 FDXRP22570 491 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 TYK2P29597 1187 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 MAT2AP31153 395 aaKnown RBP21.3■■□□□ 1
ABCF3-202ENST00000421340 AKT2P31751 481 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 SKIV2L2P42285 1042 aaKnown RBP21.3■■□□□ 1
ABCF3-202ENST00000421340 ABCG1P45844 678 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 PXNP49023 591 aaPredicted RBP21.3■■□□□ 1
ABCF3-202ENST00000421340 SLC12A2P55011 1212 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 B4GALNT1Q00973 533 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 TMEM115Q12893 351 aaPredicted RBP21.3■■□□□ 1
ABCF3-202ENST00000421340 INPP5AQ14642 412 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 CTSL3PQ5NE16 218 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 RBM20Q5T481 1227 aaKnown RBP21.3■■□□□ 1
ABCF3-202ENST00000421340 MTERF4Q7Z6M4 381 aaKnown RBP21.3■■□□□ 1
ABCF3-202ENST00000421340 WDR5BQ86VZ2 330 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 ACVR1CQ8NER5 493 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 FAM174AQ8TBP5 190 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 RLN3Q8WXF3 142 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 KLK6Q92876 244 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 SERAC1Q96JX3 654 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 BOCQ9BWV1 1114 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 LATS2Q9NRM7 1088 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 SNX15Q9NRS6 342 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 TAS2R13Q9NYV9 303 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 KLHL42Q9P2K6 505 aa21.3■■□□□ 1
ABCF3-202ENST00000421340 METTL12A8MUP2 240 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 GPR89AB7ZAQ6 455 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 PRAMEF26H0Y7S4 382 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 FPGTO14772 594 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 TPP1O14773 563 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 RAD51BO15315 384 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 OR56A5P0C7T3 313 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 GPR89BP0CG08 455 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 SLC26A3P40879 764 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 CCNFP41002 786 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 TAS2R39P59534 338 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 RAB10P61026 200 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 MAGOHP61326 146 aaKnown RBP21.29■■□□□ 1
ABCF3-202ENST00000421340 CDK3Q00526 305 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 KCTD16Q68DU8 428 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 UGT3A1Q6NUS8 523 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 LCA5Q86VQ0 697 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 SRRM1Q8IYB3 904 aaKnown RBP21.29■■□□□ 1
ABCF3-202ENST00000421340 FBXL6Q8N531 539 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 DTWD2Q8NBA8 298 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 ZNF514Q96K75 400 aaPredicted RBP21.29■■□□□ 1
ABCF3-202ENST00000421340 SMC6Q96SB8 1091 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 WDR26Q9H7D7 661 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 PHPT1Q9NRX4 125 aaPredicted RBP21.29■■□□□ 1
ABCF3-202ENST00000421340 MBD1Q9UIS9 605 aaPredicted RBP21.29■■□□□ 1
ABCF3-202ENST00000421340 FBXO4Q9UKT5 387 aa21.29■■□□□ 1
ABCF3-202ENST00000421340 H3BQF6 201 aa21.28■■□□□ 1
ABCF3-202ENST00000421340 INPP4BO15327 924 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms