RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 SNX2O60749 519 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 TJP3O95049 919 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 PRAMEF1O95521 474 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 CCDC175P0C221 793 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 GRIA1P42261 906 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 CDKN1CP49918 316 aaPredicted RBP10.1□□□□□ -0.79
HDLBP-206ENST00000417540 DUSP3P51452 185 aaPredicted RBP10.1□□□□□ -0.79
HDLBP-206ENST00000417540 TERF1P54274 439 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 GEMP55040 296 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 B4GALNT1Q00973 533 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 SEPT6Q14141 434 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 COL28A1Q2UY09 1125 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 AMZ1Q400G9 498 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 GPRC6AQ5T6X5 926 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 KCTD11Q693B1 232 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 ITPRIPL1Q6GPH6 555 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 BZW1Q7L1Q6 419 aaKnown RBP10.1□□□□□ -0.79
HDLBP-206ENST00000417540 ZNF438Q7Z4V0 828 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 C11orf96Q7Z7L8 435 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 SLC13A5Q86YT5 568 aaPredicted RBP10.1□□□□□ -0.79
HDLBP-206ENST00000417540 SLITRK4Q8IW52 837 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 NDUFAF2Q8N183 169 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 ARL14Q8N4G2 192 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 LILRA3Q8N6C8 439 aaPredicted RBP10.1□□□□□ -0.79
HDLBP-206ENST00000417540 PDCD7Q8N8D1 485 aaKnown RBP10.1□□□□□ -0.79
HDLBP-206ENST00000417540 CCDC112Q8NEF3 446 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 OR4K2Q8NGD2 314 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 CCHCR1Q8TD31 782 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 NRTNQ99748 197 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 ZSCAN5AQ9BUG6 496 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 TLR10Q9BXR5 811 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 SEMA6CQ9H3T2 930 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 LRRN3Q9H3W5 708 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 FAM96AQ9H5X1 160 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 IL26Q9NPH9 171 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 PRDM8Q9NQV8 689 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 TRNAU1APQ9NX07 287 aaKnown RBP10.1□□□□□ -0.79
HDLBP-206ENST00000417540 VPS18Q9P253 973 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 LRIT1Q9P2V4 623 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 EFR3BQ9Y2G0 817 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 IGSF10Q6WRI0 2623 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 KALRNO60229 2985 aa10.1□□□□□ -0.79
HDLBP-206ENST00000417540 GLYATL1P3A0A0U1RQE8 302 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 OR2AG2A6NM03 316 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 OR52A4PA6NMU1 304 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 MTSS1O43312 755 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 GRID2O43424 1007 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 SGTAO43765 313 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 NUAK1O60285 661 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 PTMAP06454 111 aaKnown RBP10.09□□□□□ -0.79
HDLBP-206ENST00000417540 F7P08709 466 aaPredicted RBP10.09□□□□□ -0.79
HDLBP-206ENST00000417540 BRAFP15056 766 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 TPH1P17752 444 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 MAPK9P45984 424 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 ARSDP51689 593 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 DRG2P55039 364 aaKnown RBP10.09□□□□□ -0.79
HDLBP-206ENST00000417540 PPP1CAP62136 330 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 CCDC173Q0VFZ6 552 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 NFATC2Q13469 925 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 PEX6Q13608 980 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 POU6F1Q14863 301 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 C16orf72Q14CZ0 275 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 RTP5Q14D33 572 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 INSCQ1MX18 579 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 CCDC38Q502W7 563 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 OGFOD3Q6PK18 319 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 ARHGEF18Q6ZSZ5 1173 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 TRAPPC5Q8IUR0 188 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 RASGEF1AQ8N9B8 481 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 RTP4Q96DX8 246 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 CCDC74BQ96LY2 380 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 PLEKHG4BQ96PX9 1271 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 GFM1Q96RP9 751 aaKnown RBP10.09□□□□□ -0.79
HDLBP-206ENST00000417540 VAT1Q99536 393 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 TBC1D10AQ9BXI6 508 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 CARD9Q9H257 536 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 KLC4Q9NSK0 619 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.09□□□□□ -0.79
HDLBP-206ENST00000417540 ZNHIT2Q9UHR6 403 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 TRHDEQ9UKU6 1024 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 WDR37Q9Y2I8 494 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 AK5Q9Y6K8 562 aa10.09□□□□□ -0.79
HDLBP-206ENST00000417540 C5orf60A6NFR6 353 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 FANCGO15287 622 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 B4GAT1O43505 415 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 LDB2O43679 373 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 KRT86O43790 486 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 SLC25A14O95258 325 aaPredicted RBP10.08□□□□□ -0.8
HDLBP-206ENST00000417540 IFNB1P01574 187 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 GLB1P16278 677 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 HMGCLP35914 325 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 KCNJ1P48048 391 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 RPIAP49247 311 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 GFERP55789 205 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 UBE2IP63279 158 aaKnown RBP10.08□□□□□ -0.8
HDLBP-206ENST00000417540 XIAPP98170 497 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 E2F1Q01094 437 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 NFE2L1Q14494 772 aa10.08□□□□□ -0.8
HDLBP-206ENST00000417540 NR1D2Q14995 579 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms