RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TEX44Q53QW1 395 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 SEL1L2Q5TEA6 688 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 BZW1Q7L1Q6 419 aaKnown RBP17.85■□□□□ 0.45
VCP-202ENST00000417448 ZNF567Q8N184 647 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 C1orf54Q8WWF1 131 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 ART4Q93070 314 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 BRD8Q9H0E9 1235 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 TMEM168Q9H0V1 697 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 GLOD4Q9HC38 313 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 FGF22Q9HCT0 170 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 AKAP7Q9P0M2 348 aaPredicted RBP17.85■□□□□ 0.45
VCP-202ENST00000417448 TP53TG5Q9Y2B4 290 aa17.85■□□□□ 0.45
VCP-202ENST00000417448 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.84■□□□□ 0.45
VCP-202ENST00000417448 TSPAN11A1L157 253 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 TMEM202A6NGA9 273 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 HTRA2O43464 458 aaPredicted RBP17.84■□□□□ 0.45
VCP-202ENST00000417448 CEP104O60308 925 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 AGFG2O95081 481 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 MT-CYBP00156 380 aaPredicted RBP17.84■□□□□ 0.45
VCP-202ENST00000417448 ATP1A1P05023 1023 aaKnown RBP17.84■□□□□ 0.45
VCP-202ENST00000417448 MAZP56270 477 aaKnown RBP17.84■□□□□ 0.45
VCP-202ENST00000417448 SNX1Q13596 522 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 GRM3Q14832 879 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 PCSK7Q16549 785 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 SLC13A5Q86YT5 568 aaPredicted RBP17.84■□□□□ 0.45
VCP-202ENST00000417448 ECHDC3Q96DC8 303 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 DPEP2Q9H4A9 486 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 SMARCAL1Q9NZC9 954 aa17.84■□□□□ 0.45
VCP-202ENST00000417448 PRRC2CQ9Y520 2896 aaKnown RBP17.84■□□□□ 0.45
VCP-202ENST00000417448 HIVEP3Q5T1R4 2406 aa17.83■□□□□ 0.45
VCP-202ENST00000417448 KCNN4O15554 427 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 PGLSO95336 258 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 CPP00450 1065 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 PCCBP05166 539 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 NFKB1P19838 968 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 DEFB109BQ30KR1 87 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 TMEM52BQ4KMG9 183 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 ATP1A1-AS1Q5TC04 95 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 DENND2CQ68D51 928 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 ALG1LQ6GMV1 187 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 CAPRIN2Q6IMN6 1127 aaKnown RBP17.83■□□□□ 0.44
VCP-202ENST00000417448 BRAT1Q6PJG6 821 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 PID1Q7Z2X4 250 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 ZNF438Q7Z4V0 828 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 UNC5BQ8IZJ1 945 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 TAB3Q8N5C8 712 aaPredicted RBP17.83■□□□□ 0.44
VCP-202ENST00000417448 PLA2G15Q8NCC3 412 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 APOBEC4Q8WW27 367 aaKnown RBP17.83■□□□□ 0.44
VCP-202ENST00000417448 MS4A14Q96JA4 679 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 TEKT5Q96M29 485 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 DDA1Q9BW61 102 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 KLHL8Q9P2G9 620 aaPredicted RBP17.83■□□□□ 0.44
VCP-202ENST00000417448 PILRAQ9UKJ1 303 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 DNPEPQ9ULA0 475 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 ZNF106Q9H2Y7 1883 aaKnown RBP17.83■□□□□ 0.44
VCP-202ENST00000417448 SHANK1Q9Y566 2161 aa17.83■□□□□ 0.44
VCP-202ENST00000417448 LOC101059948A0A1B0GTJ6 334 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 A1L4Q6 167 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 GOLGA6L9A6NEM1 432 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 HACD1B0YJ81 288 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 CAPN5O15484 640 aaPredicted RBP17.82■□□□□ 0.44
VCP-202ENST00000417448 PMPCBO75439 489 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 PRLP01236 227 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 GNLYP22749 145 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 CD1CP29017 333 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 ALDH4A1P30038 563 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 LIG3P49916 1009 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 LIMK2P53671 638 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 XRCC4Q13426 336 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 ESPL1Q14674 2120 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 NR1D2Q14995 579 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 ARMC12Q5T9G4 340 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 ZNF787Q6DD87 383 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 PRUNE1Q86TP1 453 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 C17orf82Q86X59 251 aaPredicted RBP17.82■□□□□ 0.44
VCP-202ENST00000417448 CDKL3Q8IVW4 592 aaPredicted RBP17.82■□□□□ 0.44
VCP-202ENST00000417448 LPCAT1Q8NF37 534 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 CCDC110Q8TBZ0 833 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 SSC4DQ8WTU2 575 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 PIH1D2Q8WWB5 315 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 IMP4Q96G21 291 aaKnown RBP17.82■□□□□ 0.44
VCP-202ENST00000417448 SPRY4Q9C004 299 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 GPN2Q9H9Y4 310 aaPredicted RBP17.82■□□□□ 0.44
VCP-202ENST00000417448 SPATS2LQ9NUQ6 558 aaKnown RBP17.82■□□□□ 0.44
VCP-202ENST00000417448 OCIAD1Q9NX40 245 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 B4GALT6Q9UBX8 382 aa17.82■□□□□ 0.44
VCP-202ENST00000417448 C2CD3Q4AC94 2353 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 KIF5CO60282 957 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 FZD6O60353 706 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 SOCS5O75159 536 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 SEMA7AO75326 666 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 MPSTP25325 297 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 CSF2RBP32927 897 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 MMP12P39900 470 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 RALGDSQ12967 914 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 GALNT3Q14435 633 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 SIX1Q15475 284 aaPredicted RBP17.81■□□□□ 0.44
VCP-202ENST00000417448 FHL5Q5TD97 284 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 ANKS6Q68DC2 871 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 ERAP2Q6P179 960 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms