RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 PARD3Q8TEW0 1356 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 A0A1B0GVM2 712 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 A0A1W2PR48 441 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 WDR91A4D1P6 747 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 BTBD17A6NE02 478 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 C5orf52A6NGY3 159 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 OR52A4PA6NMU1 304 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 MEI4A8MW99 385 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 USP17L23D6RBM5 183 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 M0QYG6 137 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 MAGEB2O15479 319 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ST8SIA3O43173 380 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SPRY1O43609 319 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ATP5HO75947 161 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SEC31AO94979 1220 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 GAS8O95995 478 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 IGHEP01854 428 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 UGT2B4P06133 528 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CRYGCP07315 174 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CHRM4P08173 479 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 EBLN1P0CF75 366 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC2A3P11169 496 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CYP19A1P11511 503 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ADH5P11766 374 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 PFKFB1P16118 471 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CEBPBP17676 345 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 FUT1P19526 365 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CCND3P30281 292 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 HOXA6P31267 233 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC6A4P31645 630 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 GUCY1A2P33402 732 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CRHR1P34998 444 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SERPINB6P35237 376 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 GATA4P43694 442 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 LEPRP48357 1165 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ANXA11P50995 505 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 HNRNPFP52597 415 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 GTF2A1P52655 376 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 MYL6P60660 151 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TSPAN5P62079 268 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 LIPEQ05469 1076 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 NCBP1Q09161 790 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 DBPQ10586 325 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF124Q15973 351 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SYT16Q17RD7 645 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 USH1GQ495M9 461 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM98BQ52LJ0 330 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 HSP90AA4PQ58FG1 418 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF667Q5HYK9 610 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 PHYHD1Q5SRE7 291 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 C9orf50Q5SZB4 431 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ARHGAP40Q5TG30 622 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 PRAMEF8Q5VWM4 474 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM160B1Q5W0V3 765 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CLEC6AQ6EIG7 209 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 MSANTD2Q6P1R3 559 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 BRAT1Q6PJG6 821 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SEM1Q6ZVN7 128 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 STXBP4Q6ZWJ1 553 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 MED25Q71SY5 747 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 DET1Q7L5Y6 550 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TAS1R1Q7RTX1 841 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TRIM46Q7Z4K8 759 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 GPR142Q7Z601 462 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 VTCN1Q7Z7D3 282 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CAMK1DQ8IU85 385 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 PLXDC1Q8IUK5 500 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ARID3BQ8IVW6 561 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SPARTQ8N0X7 666 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ABRAQ8N0Z2 381 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TOP6BLQ8N6T0 577 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TTLL6Q8N841 843 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM71CQ8NEG0 241 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TRPV3Q8NET8 790 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TMEM185AQ8NFB2 350 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 OR2T3Q8NH03 318 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SUN3Q8TAQ9 357 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 RAB3IL1Q8TBN0 382 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 MYCBPAPQ8TBZ2 947 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 BPIFB1Q8TDL5 484 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CD300LFQ8TDQ1 290 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 U2AF1L4Q8WU68 220 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ASZ1Q8WWH4 475 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 RAB40AQ8WXH6 277 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 FIG4Q92562 907 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 LARP4BQ92615 738 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ULK4Q96C45 1275 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 AP2M1Q96CW1 435 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 HAVCR1Q96D42 359 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ARHGEF26Q96DR7 871 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 MISP3Q96FF7 219 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ELMOD3Q96FG2 381 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 BSCL2Q96G97 398 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 THOC3Q96J01 351 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 APOLD1Q96LR9 279 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 INPP4AQ96PE3 977 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 FCRL4Q96PJ5 515 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CDRT15Q96T59 188 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 GPR20Q99678 358 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ASCL2Q99929 193 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms