RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LAYNQ6UX15 382 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 RAD9BQ6WBX8 426 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.94□□□□□ -1.62
VPS41-205ENST00000414632 RFX8Q6ZV50 586 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 LPCAT2Q7L5N7 544 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 SETD3Q86TU7 594 aaPredicted RBP4.94□□□□□ -1.62
VPS41-205ENST00000414632 HDDC3Q8N4P3 179 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 ZCCHC9Q8N567 271 aaKnown RBP4.94□□□□□ -1.62
VPS41-205ENST00000414632 AADATQ8N5Z0 425 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 NPWQ8N729 165 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 RTL3Q8N8U3 475 aaKnown RBP4.94□□□□□ -1.62
VPS41-205ENST00000414632 DCAF4L2Q8NA75 395 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 ACRBPQ8NEB7 543 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 FNIP1Q8TF40 1166 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 ZC3H10Q96K80 434 aaKnown RBP4.94□□□□□ -1.62
VPS41-205ENST00000414632 OMDQ99983 421 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 DESI2Q9BSY9 194 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 SLC39A8Q9C0K1 460 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 RSPH9Q9H1X1 276 aaPredicted RBP4.94□□□□□ -1.62
VPS41-205ENST00000414632 PABPC3Q9H361 631 aaKnown RBP4.94□□□□□ -1.62
VPS41-205ENST00000414632 ZDHHC6Q9H6R6 413 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 CATSPERBQ9H7T0 1116 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 PCDH18Q9HCL0 1135 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 ITM2CQ9NQX7 267 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 FBXL12Q9NXK8 326 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 GALNT8Q9NY28 637 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 WSB2Q9NYS7 404 aaPredicted RBP4.94□□□□□ -1.62
VPS41-205ENST00000414632 DTLQ9NZJ0 730 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 CWC15Q9P013 229 aaKnown RBP4.94□□□□□ -1.62
VPS41-205ENST00000414632 PCDHGB6Q9Y5F9 930 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 GON4LQ3T8J9 2241 aa4.94□□□□□ -1.62
VPS41-205ENST00000414632 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 BCLAF3A2AJT9 711 aaKnown RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 FAM227AF5H4B4 570 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 KPNA3O00505 521 aaPredicted RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 INSIG1O15503 277 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 KDELR3O43731 214 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 MFSD11O43934 449 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 ZNF821O75541 412 aaPredicted RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 GJB3O75712 270 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 TMCC1O94876 653 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 PROSCO94903 275 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 SEMA4FO95754 770 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 MPOP05164 745 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 ENO2P09104 434 aaPredicted RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 HTR1BP28222 390 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 MAT2AP31153 395 aaKnown RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 CHRNA3P32297 505 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 DRD3P35462 400 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 PCK1P35558 622 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 PAPOLAP51003 745 aaKnown RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 CCNHP51946 323 aaPredicted RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 AIF1P55008 147 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 PPP2CBP62714 309 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 PPP2CAP67775 309 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 SEMG2Q02383 582 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 ZNF33AQ06730 810 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 SEMA5AQ13591 1074 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 BYSLQ13895 437 aaKnown RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 DPYSQ14117 519 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 DPYSL3Q14195 570 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 ELAVL3Q14576 367 aaKnown RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 E2F5Q15329 346 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 CSRP2Q16527 193 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 LONRF1Q17RB8 773 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 C3orf36Q3SXR2 165 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 RETSATQ6NUM9 610 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 NPNTQ6UXI9 565 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 SLC36A4Q6YBV0 504 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 ZNF783Q6ZMS7 281 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 DPY19L3Q6ZPD9 716 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 POLNQ7Z5Q5 900 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 ARHGAP12Q8IWW6 846 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 NIPA2Q8N8Q9 360 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 KDM1BQ8NB78 822 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 KCTD6Q8NC69 237 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 VPS37AQ8NEZ2 397 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 OR2A12Q8NGT7 310 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 OR2I1PQ8NGU4 316 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 OR8D1Q8WZ84 308 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 KLK6Q92876 244 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 ARRDC3Q96B67 414 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 TSPAN17Q96FV3 270 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 CSPG4P5Q96PW8 444 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 PPP1R9BQ96SB3 815 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 MYOCQ99972 504 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 GTPBP2Q9BX10 602 aaKnown RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 TRPM6Q9BX84 2022 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 CALN1Q9BXU9 219 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 BTBD1Q9H0C5 482 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 MAGEH1Q9H213 219 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 NEUROG2Q9H2A3 272 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 LRRC19Q9H756 370 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 UVRAGQ9P2Y5 699 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 HECAQ9UBI9 543 aaPredicted RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 FTSJ1Q9UET6 329 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 EVLQ9UI08 416 aaPredicted RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 EIF2B4Q9UI10 523 aaKnown RBP4.93□□□□□ -1.62
VPS41-205ENST00000414632 ADAMTS6Q9UKP5 1117 aa4.93□□□□□ -1.62
VPS41-205ENST00000414632 HPCAL4Q9UM19 191 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms