RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TBATAQ96M53 351 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 TMEM74Q96NL1 305 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 ZNF347Q96SE7 839 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 ACBD6Q9BR61 282 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 BEGAINQ9BUH8 593 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 ABHD16BQ9H3Z7 469 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 MPP6Q9NZW5 540 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 CACNG4Q9UBN1 327 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 RIMKLBQ9ULI2 386 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 DOLKQ9UPQ8 538 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 PLXNB2O15031 1838 aa17.5■□□□□ 0.39
SDCBP-202ENST00000413219 SUPT3HB4E1H0 165 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 STX16O14662 325 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 SYNCRIPO60506 623 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 SNX2O60749 519 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 GOT2P00505 430 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 THP07101 528 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 ATXN1LP0C7T5 689 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 RAP2AP10114 183 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 MLLT6P55198 1093 aaPredicted RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 OR4D2P58180 307 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 UFM1P61960 85 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 DSC2Q02487 901 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 OTUD3Q5T2D3 398 aaPredicted RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 EGFLAMQ63HQ2 1017 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 LINC00299Q6ZSB3 139 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 TFAP2DQ7Z6R9 452 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 C14orf80Q86SX3 495 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 TTC30BQ8N4P2 665 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 AADATQ8N5Z0 425 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 CASP10Q92851 521 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 ZFC3H1O60293 1989 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 SYCE1LA8MT33 242 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 RPP40O75818 363 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 MT-ND1P03886 318 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 ODC1P11926 461 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 RPL9P32969 192 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 MAGEA10P43363 369 aaPredicted RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 MAXP61244 160 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 MFSD10Q14728 455 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 FAM98BQ52LJ0 330 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 FRA10AC1Q70Z53 315 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 ITIH5Q86UX2 942 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 IGFN1Q86VF2 1251 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 SPARTQ8N0X7 666 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 C3orf58Q8NDZ4 430 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 BPIFB6Q8NFQ5 453 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 TMBIM1Q969X1 311 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 RPL10LQ96L21 214 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 AGO3Q9H9G7 860 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 INTS7Q9NVH2 962 aaKnown RBP17.49■□□□□ 0.39
SDCBP-202ENST00000413219 GIN1Q9NXP7 522 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 RNF112Q9ULX5 631 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 KCTD3Q9Y597 815 aa17.49■□□□□ 0.39
SDCBP-202ENST00000413219 C1orf232A0A0U1RR37 186 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 MSI1O43347 362 aaKnown RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 B4GAT1O43505 415 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 MLYCDO95822 493 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 GNA12Q03113 381 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 SLC10A7Q0GE19 358 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 TOP3AQ13472 1001 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 BFSP2Q13515 415 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 IHHQ14623 411 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 ZNF846Q147U1 533 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 TYSND1Q2T9J0 566 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 ZIK1Q3SY52 487 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 TMEM214Q6NUQ4 689 aaKnown RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 TXNDC11Q6PKC3 985 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 ZFAND4Q86XD8 727 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 CSF3RQ99062 836 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 SEMA4BQ9NPR2 832 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 UXTQ9UBK9 157 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 A0A1B0GTL3 188 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 LCHNA4D1U4 455 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 J3KR12 359 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 KLK8O60259 260 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 ADAM23O75077 832 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 RSL1D1O76021 490 aaKnown RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 ANXA6P08133 673 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 RHOQP17081 205 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 PLA2G16P53816 162 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 ITGADQ13349 1161 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 BTG3Q14201 252 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 TIGD2Q4W5G0 525 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 TIGD5Q53EQ6 642 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 R3HCC1LQ7Z5L2 792 aaKnown RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 METTL23Q86XA0 190 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 CLEC4FQ8N1N0 589 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 ABHD11Q8NFV4 315 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 SCAMP5Q8TAC9 235 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 ARRDC2Q8TBH0 407 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 PPP1R13LQ8WUF5 828 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 SLC22A17Q8WUG5 538 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 FKBP10Q96AY3 582 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 HMCESQ96FZ2 354 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 PKMYT1Q99640 499 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 FEM1AQ9BSK4 669 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 CATSPERZQ9NTU4 200 aa17.48■□□□□ 0.39
SDCBP-202ENST00000413219 TRNAU1APQ9NX07 287 aaKnown RBP17.48■□□□□ 0.39
SDCBP-202ENST00000413219 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.48■□□□□ 0.391e-6■■■□□ 17.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms