RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 SUOXP51687 545 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 HADHBP55084 474 aaKnown RBP6.89□□□□□ -1.31
LSM8-202ENST00000411938 ITGA1P56199 1179 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 GEMIN4P57678 1058 aaKnown RBP6.89□□□□□ -1.31
LSM8-202ENST00000411938 ZRSR2Q15696 482 aaKnown RBP6.89□□□□□ -1.31
LSM8-202ENST00000411938 EFHC1Q5JVL4 640 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 CEP85LQ5SZL2 805 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 AGBL2Q5U5Z8 902 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 C11orf63Q6NUN7 778 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 ERAP2Q6P179 960 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 DAAM2Q86T65 1068 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 TMEM110Q86TL2 294 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 NRROSQ86YC3 692 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 RHOT2Q8IXI1 618 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 RHOT1Q8IXI2 618 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 NAGSQ8N159 534 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 PPM1KQ8N3J5 372 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 BCAS4Q8TDM0 211 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 THAP4Q8WY91 577 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 SEC14L1Q92503 715 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 NCSTNQ92542 709 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 ARHGEF2Q92974 986 aaKnown RBP6.89□□□□□ -1.31
LSM8-202ENST00000411938 NT5C1BQ96P26 610 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 SLC2A13Q96QE2 648 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 RANBP9Q96S59 729 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 NAP1L3Q99457 506 aaPredicted RBP6.89□□□□□ -1.31
LSM8-202ENST00000411938 LGR4Q9BXB1 951 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 DDX47Q9H0S4 455 aaKnown RBP6.89□□□□□ -1.31
LSM8-202ENST00000411938 RAB17Q9H0T7 212 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 CARD9Q9H257 536 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 GOLPH3Q9H4A6 298 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 ACTL8Q9H568 366 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 WDCPQ9H6R7 721 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 WDR26Q9H7D7 661 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 TMBIM4Q9HC24 238 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 PCDH12Q9NPG4 1184 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 ANLNQ9NQW6 1124 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 PIGVQ9NUD9 493 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 LNPEPQ9UIQ6 1025 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 DNAJC12Q9UKB3 198 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 PADI1Q9ULC6 663 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 COQ4Q9Y3A0 265 aa6.89□□□□□ -1.31
LSM8-202ENST00000411938 DNHD1Q96M86 4753 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 JMJD1CQ15652 2540 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 MYO7BQ6PIF6 2116 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 ZGRF1Q86YA3 2104 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 A0A087WUV0 522 aaPredicted RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 ANKRD62A6NC57 917 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 FAM187AA6NFU0 413 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 A6NL46 340 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 MIF4GDA9UHW6 222 aaKnown RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 I6L893 689 aaPredicted RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 NDUFAB1O14561 156 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 BUB1BO60566 1050 aaPredicted RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 RECQL5O94762 991 aaPredicted RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 KIAA0754O94854 1291 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 KRT14P02533 472 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 SNRPB2P08579 225 aaKnown RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 HOXC4P09017 264 aaPredicted RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 MYZAPP0CAP1 466 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 ITGA3P26006 1051 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 LSP1P33241 339 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 HSD17B3P37058 310 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 ETFBP38117 255 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 GARSP41250 739 aaKnown RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 ACTR1BP42025 376 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 MAPK9P45984 424 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 GNPDA1P46926 289 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 CXCR3P49682 368 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 ACTR1AP61163 376 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 CTBSQ01459 385 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 PEX6Q13608 980 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 DHX34Q14147 1143 aaKnown RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 AGERQ15109 404 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 TCEAL1Q15170 157 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 UAP1Q16222 522 aaPredicted RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 UGP2Q16851 508 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 UGT8Q16880 541 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 PLEKHN1Q494U1 663 aaPredicted RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 BRMS1LQ5PSV4 323 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 WDR74Q6RFH5 385 aaPredicted RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 SPNS3Q6ZMD2 512 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 MICALCLQ6ZW33 695 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 B4GALNT4Q76KP1 1039 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 TMC3Q7Z5M5 1100 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 HPS6Q86YV9 775 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 RASGRP3Q8IV61 690 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 MMP21Q8N119 569 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 RBMXL3Q8N7X1 1067 aaKnown RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 C3orf20Q8ND61 904 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 CT55Q8WUE5 264 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 KAT5Q92993 513 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 VOPP1Q96AW1 172 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 ELMO2Q96JJ3 720 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 NCAPGQ9BPX3 1015 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 ZYG11BQ9C0D3 744 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 LATS2Q9NRM7 1088 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 TMEM51Q9NW97 253 aa6.88□□□□□ -1.31
LSM8-202ENST00000411938 TRNAU1APQ9NX07 287 aaKnown RBP6.88□□□□□ -1.31
LSM8-202ENST00000411938 ARHGEF38Q9NXL2 777 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms