RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 GRID2O43424 1007 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 AVILO75366 819 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 CKMT1AP12532 417 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 CKMT2P17540 419 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 MGAT1P26572 445 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 ACADVLP49748 655 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 CDKN1CP49918 316 aaPredicted RBP22.1■■□□□ 1.13
PTCD3-203ENST00000409783 DR1Q01658 176 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 LAMB3Q13751 1172 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 SKIDA1Q1XH10 827 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 LDLRAP1Q5SW96 308 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 OGFOD3Q6PK18 319 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 SYDE1Q6ZW31 735 aaPredicted RBP22.1■■□□□ 1.13
PTCD3-203ENST00000409783 ERMP1Q7Z2K6 904 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 SNX20Q7Z614 316 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 ZNF547Q8IVP9 402 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 SFTPA2Q8IWL1 248 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 SLC35F3Q8IY50 421 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 PEX13Q92968 403 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 KRT12Q99456 494 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 GSDMCQ9BYG8 508 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 IL22Q9GZX6 179 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 CHRAC1Q9NRG0 131 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 SPATS2LQ9NUQ6 558 aaKnown RBP22.1■■□□□ 1.13
PTCD3-203ENST00000409783 BFARQ9NZS9 450 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 ZNHIT2Q9UHR6 403 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 ASXL3Q9C0F0 2248 aa22.1■■□□□ 1.13
PTCD3-203ENST00000409783 DNALI1O14645 258 aaPredicted RBP22.09■■□□□ 1.13
PTCD3-203ENST00000409783 TTI1O43156 1089 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 CDK14O94921 469 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 PRSS56P0CW18 603 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 MLNP12872 115 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 ACP1P24666 158 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 MAGEA3P43357 314 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 ILF3Q12906 894 aaKnown RBP eCLIP22.09■■□□□ 1.133e-6■■■□□ 15.4
PTCD3-203ENST00000409783 LRP8Q14114 963 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 DHX34Q14147 1143 aaKnown RBP22.09■■□□□ 1.13
PTCD3-203ENST00000409783 NLRP9Q7RTR0 991 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 C11orf96Q7Z7L8 435 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 PPIL6Q8IXY8 311 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 RASGEF1AQ8N9B8 481 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 GDAP1Q8TB36 358 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 CCDC97Q96F63 343 aaPredicted RBP22.09■■□□□ 1.13
PTCD3-203ENST00000409783 TRIM51Q9BSJ1 452 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 FAM96AQ9H5X1 160 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 TREX1Q9NSU2 369 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 SYBUQ9NX95 663 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 ASIC3Q9UHC3 531 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 CDC23Q9UJX2 597 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 GPR34Q9UPC5 381 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 DOLKQ9UPQ8 538 aa22.09■■□□□ 1.13
PTCD3-203ENST00000409783 CCDC162PA2VCL2 907 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 OR51F1A6NGY5 319 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 PRR19A6NJB7 356 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 NOBOXO60393 691 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 ITGALP20701 1170 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 CTSCP53634 463 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 SARNPP82979 210 aaKnown RBP22.08■■□□□ 1.13
PTCD3-203ENST00000409783 B4GALNT1Q00973 533 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 GPR33Q49SQ1 333 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 PIANPQ8IYJ0 282 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 NXPE1Q8N323 547 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 FAM46DQ8NEK8 389 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 PPHLN1Q8NEY8 458 aaKnown RBP22.08■■□□□ 1.13
PTCD3-203ENST00000409783 GPR156Q8NFN8 814 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 SCG3Q8WXD2 468 aaKnown RBP22.08■■□□□ 1.13
PTCD3-203ENST00000409783 HDAC10Q969S8 669 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 SERPINB12Q96P63 405 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 KIFC1Q9BW19 673 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 MRM3Q9HC36 420 aaKnown RBP22.08■■□□□ 1.13
PTCD3-203ENST00000409783 TAAR2Q9P1P5 351 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 SLC23A2Q9UGH3 650 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 SLC30A1Q9Y6M5 507 aa22.08■■□□□ 1.13
PTCD3-203ENST00000409783 SPEGQ15772 3267 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 IGLV3-16A0A075B6K0 115 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 GOLGA8MH3BSY2 632 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 TUBB4AP04350 444 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 FOXN2P32314 431 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 C2orf54Q08AI8 447 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 SLC30A9Q6PML9 568 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 CRTC3Q6UUV7 619 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 CHST15Q7LFX5 561 aaPredicted RBP22.07■■□□□ 1.12
PTCD3-203ENST00000409783 C17orf82Q86X59 251 aaPredicted RBP22.07■■□□□ 1.12
PTCD3-203ENST00000409783 AGGF1Q8N302 714 aaeCLIP22.07■■□□□ 1.12
PTCD3-203ENST00000409783 MPP5Q8N3R9 675 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 PNPLA1Q8N8W4 532 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 KYQ8NBH2 561 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 ULK4Q96C45 1275 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 XAB2Q9HCS7 855 aaKnown RBP22.07■■□□□ 1.12
PTCD3-203ENST00000409783 CRLS1Q9UJA2 301 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 SOX13Q9UN79 622 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 PCDHGA1Q9Y5H4 931 aa22.07■■□□□ 1.12
PTCD3-203ENST00000409783 RP1P56715 2156 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 MED19A0JLT2 244 aaPredicted RBP22.06■■□□□ 1.12
PTCD3-203ENST00000409783 EME2A4GXA9 379 aaPredicted RBP22.06■■□□□ 1.12
PTCD3-203ENST00000409783 TP73O15350 636 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 SGTAO43765 313 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 ADRB1P08588 477 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 ACP5P13686 325 aa22.06■■□□□ 1.12
PTCD3-203ENST00000409783 NMBRP28336 390 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms