RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CDC37Q16543 378 aaPredicted RBP4.46□□□□□ -1.7
CLK1-203ENST00000409769 CCDC96Q2M329 555 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 QRICH1Q2TAL8 776 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 NADSYN1Q6IA69 706 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 LRRC8DQ7L1W4 858 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 FAM160B2Q86V87 743 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 CADM3Q8N126 398 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 FAM184AQ8NB25 1140 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 NR4A3Q92570 626 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 CNOT9Q92600 299 aaKnown RBP4.46□□□□□ -1.7
CLK1-203ENST00000409769 RRP36Q96EU6 259 aaKnown RBP4.46□□□□□ -1.7
CLK1-203ENST00000409769 MAELQ96JY0 434 aaKnown RBP4.46□□□□□ -1.7
CLK1-203ENST00000409769 C8orf76Q96K31 380 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 SLF1Q9BQI6 1058 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 DCLK3Q9C098 648 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 SAGE1Q9NXZ1 904 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 BARHL2Q9NY43 387 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 NCKIPSDQ9NZQ3 722 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 VPS54Q9P1Q0 977 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 PDP2Q9P2J9 529 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.46□□□□□ -1.7
CLK1-203ENST00000409769 KIF3AQ9Y496 699 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 DOCK3Q8IZD9 2030 aa4.46□□□□□ -1.7
CLK1-203ENST00000409769 GAGE10A6NGK3 116 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 OR6C75A6NL08 312 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 BECN2A8MW95 431 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 VWA5AO00534 786 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 HOXC11O43248 304 aaPredicted RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 LDB2O43679 373 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 TOMM70O94826 608 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 CTPS1P17812 591 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 DCTDP32321 178 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 TTKP33981 857 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 RFC1P35251 1148 aaPredicted RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 ARSFP54793 590 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 RPL36AP83881 106 aaKnown RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 AKAP17AQ02040 695 aaKnown RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 FBXO43Q4G163 708 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 ATG9BQ674R7 924 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 GALNT17Q6IS24 598 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 IL20RBQ6UXL0 311 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 Q6ZSV7 163 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 Q6ZTK2 550 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 ZNF367Q7RTV3 350 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 EXOC8Q8IYI6 725 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 GHDCQ8N2G8 530 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 CPXM2Q8N436 756 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 CCDC148Q8NFR7 591 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 TNIP2Q8NFZ5 429 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 CHURC1Q8WUH1 139 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 PPM1EQ8WY54 764 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 DNASE2BQ8WZ79 361 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 TMEM18Q96B42 140 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 OPTNQ96CV9 577 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 POLDIP3Q9BY77 421 aaKnown RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 SEZ6LQ9BYH1 1024 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 ZMYND12Q9H0C1 365 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 MROH8Q9H579 483 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 EPHX3Q9H6B9 360 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 RPAP3Q9H6T3 665 aaPredicted RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 SLC38A10Q9HBR0 1119 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 VAT1LQ9HCJ6 419 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 WDR6Q9NNW5 1121 aaKnown RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 BEX4Q9NWD9 120 aaPredicted RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 ALKBH4Q9NXW9 302 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 HCN3Q9P1Z3 774 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 IFT80Q9P2H3 777 aaPredicted RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 SLC13A4Q9UKG4 626 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 KCNJ14Q9UNX9 436 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 SLC45A1Q9Y2W3 748 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 SRPRBQ9Y5M8 271 aaKnown RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 THSD7BQ9C0I4 1608 aa4.45□□□□□ -1.7
CLK1-203ENST00000409769 TRIP12Q14669 1992 aaPredicted RBP4.45□□□□□ -1.7
CLK1-203ENST00000409769 WDR81Q562E7 1941 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 KIAA1217Q5T5P2 1943 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 LRRC37A2A6NM11 1700 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 MGAMO43451 1857 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 VPS37CA5D8V6 355 aaPredicted RBP4.44□□□□□ -1.7
CLK1-203ENST00000409769 CBY3A6NI87 242 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 BTBD18B2RXH4 712 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 TEX22C9J3V5 150 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 INAFM1C9JVW0 142 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 H3BQV1 296 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 ATP2A1O14983 1001 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 PER2O15055 1255 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 EDIL3O43854 480 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 FLOT1O75955 427 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 ICAM1P05362 532 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 XBP1P17861 261 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 KRT2P35908 639 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 HUNKP57058 714 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 SNAP25P60880 206 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 DSC1Q08554 894 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 FAM27E3Q08E93 113 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 COG2Q14746 738 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 ZNF284Q2VY69 593 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 DCAF6Q58WW2 860 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 ZNF766Q5HY98 468 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 RGMBQ6NW40 437 aa4.44□□□□□ -1.7
CLK1-203ENST00000409769 C8orf82Q6P1X6 216 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms