RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TREML1Q86YW5 311 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 CAMK1DQ8IU85 385 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ADHFE1Q8IWW8 467 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 GPR151Q8TDV0 419 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 STARD8Q92502 1023 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 B3GNT4Q9C0J1 378 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 C11orf16Q9NQ32 467 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 FBXL12Q9NXK8 326 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 PXDNLA1KZ92 1463 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 E9PAM4 449 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 MED26O95402 600 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 RTP1P59025 263 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 LSM12Q3MHD2 195 aaKnown RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 INTS11Q5TA45 600 aaKnown RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 SLC9A4Q6AI14 798 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 OR5B17Q8NGF7 314 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 NPAS2Q99743 824 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 IKZF4Q9H2S9 585 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 EXD2Q9NVH0 621 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ERVK-18Q9QC07 812 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 TPRKBQ9Y3C4 175 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 C2orf71A6NGG8 1288 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 HSPA7P48741 367 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 RPIAP49247 311 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 BCAP31P51572 246 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 KANSL1Q7Z3B3 1105 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF398Q8TD17 642 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 PRDM12Q9H4Q4 367 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ABCB10Q9NRK6 738 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM216Q9P0N5 145 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 TNPO3Q9Y5L0 923 aaKnown RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ADGRB3O60242 1522 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 A0A0J9YVX5 310 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 C1QTNF8P60827 252 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 TRMT2AQ8IZ69 625 aaKnown RBP8.36□□□□□ -1.07
SCN9A-203ENST00000409672 PPTC7Q8NI37 304 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 ITCHQ96J02 903 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 EBF3Q9H4W6 596 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 NOD2Q9HC29 1040 aa8.36□□□□□ -1.07
SCN9A-203ENST00000409672 KMOO15229 486 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 LAMP2P13473 410 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 RFX5P48382 616 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 RPL6Q02878 288 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF542PQ5EBM4 170 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CAPN13Q6MZZ7 669 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ATG14Q6ZNE5 492 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 GPAT4Q86UL3 456 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 FOXRED2Q8IWF2 684 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 HEPHQ9BQS7 1158 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 LOC102724159A0A0B4J2E5 919 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SLC26A4O43511 780 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 UBOX5O94941 541 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ERBB2P04626 1255 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SLC35G6P0C7Q6 338 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CCND1P24385 295 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 HSD11B1P28845 292 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 NFKB2Q00653 900 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CD47Q08722 323 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 PWP2Q15269 919 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CCNL2Q96S94 520 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ADGRA3Q8IWK6 1321 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CCDC163A0A0D9SF12 145 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SMAPO00193 183 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 USP2O75604 605 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 IFNGP01579 166 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 MT-ND1P03886 318 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SERPINE1P05121 402 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 KLK3P07288 261 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 MAPTP10636 758 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF823P16415 610 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ACTR1BP42025 376 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 PSEN1P49768 467 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ACTR1AP61163 376 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 DSC2Q02487 901 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CWF19L1Q69YN2 538 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 MZT2AQ6P582 158 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CXXC5Q7LFL8 322 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 NUP54Q7Z3B4 507 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 DBF4BQ8NFT6 615 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SNX33Q8WV41 574 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 APOLD1Q96LR9 279 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 THAP1Q9NVV9 213 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 GRIN2DO15399 1336 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SERPINB7O75635 380 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 NOL4O94818 638 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CBX6O95503 412 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 GPR68Q15743 365 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 VARS2Q5ST30 1063 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 CARD17Q5XLA6 110 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 C10orf107Q8IVU9 208 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 BEND7Q8N7W2 519 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 GTPBP3Q969Y2 492 aaKnown RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 MMABQ96EY8 250 aaPredicted RBP8.35□□□□□ -1.07
SCN9A-203ENST00000409672 TBC1D14Q9P2M4 693 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 SALL1Q9NSC2 1324 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 ADRB2P07550 413 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 FCGR1AP12314 374 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 HSPA13P48723 471 aa8.35□□□□□ -1.07
SCN9A-203ENST00000409672 GATMP50440 423 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms