RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 B4DGG1 531 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 CDC7O00311 574 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 UBDO15205 165 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 TM9SF1O15321 606 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 FKBP9O95302 570 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 CHRM1P11229 460 aaPredicted RBP11.31□□□□□ -0.6
SNX13-202ENST00000409604 MLNP12872 115 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 UBE3AQ05086 875 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 CACNG1Q06432 222 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 ZNF789Q5FWF6 425 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 CRTC1Q6UUV9 634 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 FKBP9P1Q75LS8 142 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 NKAPQ8N5F7 415 aaKnown RBP11.31□□□□□ -0.6
SNX13-202ENST00000409604 TBC1D19Q8N5T2 526 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 C12orf66Q96MD2 445 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 TBCDQ9BTW9 1192 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 SIPA1L1O43166 1804 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 NBASA2RRP1 2371 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 A8MU76 341 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 UPK3BL1B0FP48 263 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 UPK3BL2E5RIL1 263 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 H3BNC9 293 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 MUSKO15146 869 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 ABLIM3O94929 683 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 ALADP13716 330 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 TYRP1P17643 537 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 DAB2P98082 770 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 PDE1CQ14123 709 aaPredicted RBP11.31□□□□□ -0.6
SNX13-202ENST00000409604 ZNF234Q14588 700 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 FBXW10Q5XX13 1052 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 EGFLAMQ63HQ2 1017 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 PSAPL1Q6NUJ1 521 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 FAM129CQ86XR2 697 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 ARHGAP12Q8IWW6 846 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 NUS1Q96E22 293 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 WDR26Q9H7D7 661 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 STON1Q9Y6Q2 735 aa11.31□□□□□ -0.6
SNX13-202ENST00000409604 ATAD5Q96QE3 1844 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 A0A1W2PQU0 124 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 ERAL1O75616 437 aaKnown RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 FTH1P02794 183 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 CYP17A1P05093 508 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 DDX6P26196 483 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNX13-202ENST00000409604 GALK1P51570 392 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 LIMK2P53671 638 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 CLDN2P57739 230 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 PEX6Q13608 980 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 PTK2BQ14289 1009 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 PRKD1Q15139 912 aaPredicted RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 MTSS1LQ765P7 747 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 FRMD1Q8N878 549 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 GRAMD1AQ96CP6 724 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 PRICKLE1Q96MT3 831 aaPredicted RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 BOCQ9BWV1 1114 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 MIEF1Q9NQG6 463 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 ZDHHC7Q9NXF8 308 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 CCT8L1PA6NM43 557 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 FCHO1O14526 889 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 ATG13O75143 517 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 PDE5AO76074 875 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 VIPP01282 170 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 CES1P23141 567 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 ATP5F1P24539 256 aaPredicted RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 HTR7P34969 479 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 GJA4P35212 333 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 GRIA3P42263 894 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 CLCN4P51793 760 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 GPNMBQ14956 572 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 TAF1AQ15573 450 aaPredicted RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 SUSD1Q6UWL2 747 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 ALYREFQ86V81 257 aaKnown RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 FAM3CQ92520 227 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 HLA-CQ95604 372 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 OTULINQ96BN8 352 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 TSSK3Q96PN8 268 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 LENG8Q96PV6 779 aaPredicted RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 LMAN1LQ9HAT1 526 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 THAP1Q9NVV9 213 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 FNIP2Q9P278 1114 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 TEX264Q9Y6I9 313 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 KANSL1LA0AUZ9 987 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 POP7O75817 140 aaKnown RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 KRT6AP02538 564 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 KRT6BP04259 564 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 CHRNGP07510 517 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 GRK2P25098 689 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 KRT6CP48668 564 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 PKNOX1P55347 436 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 UBAP2LQ14157 1087 aaKnown RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 CCDC153Q494R4 210 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 ARL13AQ5H913 290 aaPredicted RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 SIX5Q8N196 739 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 OR56A4Q8NGH8 313 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 EEF1AKMT1Q8WVE0 214 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 MRPL38Q96DV4 380 aaKnown RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 IL12RB2Q99665 862 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 XKR8Q9H6D3 395 aa11.3□□□□□ -0.6
SNX13-202ENST00000409604 SPATA6Q9NWH7 488 aaPredicted RBP11.3□□□□□ -0.6
SNX13-202ENST00000409604 TRPC4Q9UBN4 977 aa11.3□□□□□ -0.6
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