RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 ACTL7BQ9Y614 415 aa16.67■□□□□ 0.26
SSB-202ENST00000409333 ABCA7Q8IZY2 2146 aa16.67■□□□□ 0.26
SSB-202ENST00000409333 ZFC3H1O60293 1989 aaKnown RBP16.67■□□□□ 0.26
SSB-202ENST00000409333 TP53BP1Q12888 1972 aaPredicted RBP16.67■□□□□ 0.26
SSB-202ENST00000409333 IGLV3-16A0A075B6K0 115 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 LRRC72A6NJI9 287 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 PRMT5O14744 637 aaPredicted RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 RAD51BO15315 384 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 BRAFP15056 766 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 ZNF7P17097 686 aaPredicted RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 CSRP3P50461 194 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 ADARP55265 1226 aaKnown RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 TAS2R39P59534 338 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 TIAL1Q01085 375 aaKnown RBP eCLIP16.66■□□□□ 0.262e-6■■□□□ 12.9
SSB-202ENST00000409333 POU4F1Q01851 419 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 SGCGQ13326 291 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 ITIH4Q14624 930 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 LRRC14Q15048 493 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 IRF4Q15306 451 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 MAP7D1Q3KQU3 841 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 PPM1JQ5JR12 505 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 FAM45BPQ6NSW5 357 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 NLRP8Q86W28 1048 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 TRIM69Q86WT6 500 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 TP53I13Q8NBR0 393 aaPredicted RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 DDHD1Q8NEL9 900 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 FAM45AQ8TCE6 357 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 LENG8Q96PV6 779 aaPredicted RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 CLPBQ9H078 707 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 CCDC68Q9H2F9 335 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 C6orf106Q9H6K1 298 aaPredicted RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 KCTD5Q9NXV2 234 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 MED16Q9Y2X0 877 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 VWA7Q9Y334 891 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 ZDBF2Q9HCK1 2354 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 IQCF5A8MTL0 148 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 K7ESF4 209 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 NIPSNAP2O75323 286 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 SLC25A14O95258 325 aaPredicted RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 TOP3BO95985 862 aaKnown RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 PKMP14618 531 aaKnown RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 AOC1P19801 751 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 NR1D1P20393 614 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 FDXRP22570 491 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 RPS3P23396 243 aaKnown RBP eCLIP16.66■□□□□ 0.26
SSB-202ENST00000409333 AKT1P31749 480 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 RAB10P61026 200 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 PDE1CQ14123 709 aaPredicted RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 ZKSCAN8Q15776 578 aaPredicted RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 PNCKQ6P2M8 343 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 TRIM74Q86UV6 250 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 PIM3Q86V86 326 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 CAMKK1Q8N5S9 505 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 CENPTQ96BT3 561 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 MYOCQ99972 504 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 IER2Q9BTL4 223 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 WSB2Q9NYS7 404 aaPredicted RBP16.66■□□□□ 0.26
SSB-202ENST00000409333 THADAQ6YHU6 1953 aa16.66■□□□□ 0.26
SSB-202ENST00000409333 LRP4O75096 1905 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 TTC28Q96AY4 2481 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 IGHV1OR15-9A0A0B4J2B8 117 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 C10orf142B7Z368 130 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 SLC31A1O15431 190 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 ESR1P03372 595 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 SLC35E2BP0CK96 405 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 STMN1P16949 149 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 CD6P30203 668 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 CCNFP41002 786 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 NSG1P42857 185 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 MAGEA9P43362 315 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 POLD2P49005 469 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 CCR3P51677 355 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 IRF9Q00978 393 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 SLC18A2Q05940 514 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 RAPH1Q70E73 1250 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 DET1Q7L5Y6 550 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 MTERF4Q7Z6M4 381 aaKnown RBP16.65■□□□□ 0.26
SSB-202ENST00000409333 PHYKPLQ8IUZ5 450 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 CNPY4Q8N129 248 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 BANPQ8N9N5 519 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 SELENOSQ9BQE4 189 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 SLC13A1Q9BZW2 595 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 GALPQ9UBC7 116 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 PCDHB1Q9Y5F3 818 aa16.65■□□□□ 0.26
SSB-202ENST00000409333 OAS3Q9Y6K5 1087 aaKnown RBP16.65■□□□□ 0.26
SSB-202ENST00000409333 A0A096LPK6 155 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 TMEM221A6NGB7 291 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 M0R296 226 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 ZNF217O75362 1048 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 RHOBTB1O94844 696 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 C2P06681 752 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 OXTRP30559 389 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 IGFALSP35858 605 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 SLC12A2P55011 1212 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 INPP5AQ14642 412 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 LDLRAP1Q5SW96 308 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 ADAMTSL4Q6UY14 1074 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 HEATR4Q86WZ0 1026 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 KRT222Q8N1A0 295 aa16.64■□□□□ 0.25
SSB-202ENST00000409333 LKAAEAR1Q8TD35 194 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms