RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ETV3P41162 512 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 GARSP41250 739 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 HK3P52790 923 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 ELF3P78545 371 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 PPARDQ03181 441 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 KLC1Q07866 573 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 GALNT2Q10471 571 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 TUBA3CQ13748 450 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 PTK2BQ14289 1009 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 MESDQ14696 234 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 NFATC4Q14934 902 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 ACOX1Q15067 660 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 PAFAH1B3Q15102 231 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 AGERQ15109 404 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 MARC1Q5VT66 337 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 ZCCHC8Q6NZY4 707 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 HSD11B1LQ7Z5J1 315 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 TEX26Q8N6G2 289 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 PAF1Q8N7H5 531 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SCAIQ8N9R8 606 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 KYQ8NBH2 561 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 KCTD6Q8NC69 237 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SLC35G2Q8TBE7 412 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 FAF2Q96CS3 445 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 COQ10AQ96MF6 247 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 DUSP23Q9BVJ7 150 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SLC13A1Q9BZW2 595 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 EPN3Q9H201 632 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 NHEJ1Q9H9Q4 299 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 DCAF16Q9NXF7 216 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SPASTQ9UBP0 616 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 DKK4Q9UBT3 224 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 L3MBTL1Q9Y468 752 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 RAI2Q9Y5P3 530 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 CSNK1G3Q9Y6M4 447 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 LRP4O75096 1905 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 C3orf70A6NLC5 250 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 C3orf80F5H4A9 247 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 BRINP1O60477 761 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SUPT3HO75486 399 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 PGLSO95336 258 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 FUCA1P04066 466 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 H2AFZP0C0S5 128 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 TMEM253P0C7T8 217 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SERPINB6P35237 376 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SRP54P61011 504 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 DSC2Q02487 901 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 NIPAL4Q0D2K0 466 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 TBX2Q13207 712 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 HADHQ16836 314 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 NXNQ6DKJ4 435 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SLC2A7Q6PXP3 512 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 CCBE1Q6UXH8 406 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 H2AFVQ71UI9 128 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 PCGF5Q86SE9 256 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 LURAP1LQ8IV03 231 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 CCL4L1Q8NHW4 92 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 MAPK15Q8TD08 544 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 BTN2A2Q8WVV5 523 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SCYL1Q96KG9 808 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 CATSPER2Q96P56 530 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 IL12RB2Q99665 862 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SEMA3CQ99985 751 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 ZNF670Q9BS34 389 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 PARVBQ9HBI1 364 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 DTLQ9NZJ0 730 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 RCOR3Q9P2K3 495 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 UVRAGQ9P2Y5 699 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 KLQ9UEF7 1012 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 CD84Q9UIB8 345 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 ACAD8Q9UKU7 415 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 AK5Q9Y6K8 562 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 SHROOM3Q8TF72 1996 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 SSU72P8A0A1W2PR75 194 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 FZD6O60353 706 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 SOCS5O75159 536 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 CSO75390 466 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 HEXIM1O94992 359 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 MPOP05164 745 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 HLA-DQB2P05538 268 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 HNRNPCP07910 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 GSTA1P08263 222 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 CDK4P11802 303 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 KDELR1P24390 212 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 ITPKBP27987 946 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 VIPR1P32241 457 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 PEX5P50542 639 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 RENBPP51606 427 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 PDX1P52945 283 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 POLE2P56282 527 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 PRSS12P56730 875 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 POLR2LP62875 67 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 ITKQ08881 620 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 MTM1Q13496 603 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 TRIM14Q14142 442 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 NR0B2Q15466 257 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 ESRP1Q6NXG1 681 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 NPNTQ6UXI9 565 aa9.63□□□□□ -0.87
NIF3L1-202ENST00000409020 DAAM2Q86T65 1068 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms