RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CTNNA1P35221 906 aaKnown RBP19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 HHEXQ03014 270 aa19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 PLA2G4EQ3MJ16 856 aa19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 CRTC3Q6UUV7 619 aa19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 OR4D9Q8NGE8 314 aa19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 SNRNP27Q8WVK2 155 aaKnown RBP19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 PRDM8Q9NQV8 689 aa19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 KLC4Q9NSK0 619 aa19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 SLC23A2Q9UGH3 650 aa19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 PCDHA3Q9Y5H8 950 aa19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 BOD1L1Q8NFC6 3051 aa19.05■□□□□ 0.64
SMARCB1-204ENST00000407422 HACD1B0YJ81 288 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 K7ENP7 123 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 APOC4-APOC2K7ER74 178 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 CHUKO15111 745 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 APOC2P02655 101 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 F3P13726 295 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 RBL1P28749 1068 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 HMGCLP35914 325 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 NAP1L1P55209 391 aaKnown RBP19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 SRSF6Q13247 344 aaKnown RBP19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 ATP13A5Q4VNC0 1218 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 PDPK2PQ6A1A2 396 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 INO80CQ6PI98 192 aaPredicted RBP19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 CCDC81Q6ZN84 652 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 ZFAND4Q86XD8 727 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 PHYKPLQ8IUZ5 450 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 TTC30BQ8N4P2 665 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 ACRBPQ8NEB7 543 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 IPMKQ8NFU5 416 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 PMEPA1Q969W9 287 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 SRPK1Q96SB4 655 aaKnown RBP19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 VAT1Q99536 393 aa19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 SARS2Q9NP81 518 aaKnown RBP19.04■□□□□ 0.64
SMARCB1-204ENST00000407422 H7C0C1 242 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 HGSO14964 777 aaPredicted RBP19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 EPOP01588 193 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 THRAP10827 490 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 FGF3P11487 239 aaPredicted RBP19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 ATP5OP48047 213 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 PPM1FP49593 454 aaPredicted RBP19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 GPLD1P80108 840 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 SLC1A5Q15758 541 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 ZNF547Q8IVP9 402 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 AHCYL2Q96HN2 611 aaKnown RBP19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 PLEKHG4BQ96PX9 1271 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 CCNL2Q96S94 520 aaPredicted RBP19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 FAM118BQ9BPY3 351 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 GORASP1Q9BQQ3 440 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 OSGEPL1Q9H4B0 414 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 IL26Q9NPH9 171 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 AKAP7Q9P0M2 348 aaPredicted RBP19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 RSPH14Q9UHP6 348 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 BUD23O43709 281 aaKnown RBP19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 C1QL1O75973 258 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 IPO7O95373 1038 aaKnown RBP19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 COPS2P61201 443 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 XRCC4Q13426 336 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 CCDC181Q5TID7 509 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 KIAA1614Q5VZ46 1190 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 AADACL2Q6P093 401 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 TMEM71Q6P5X7 295 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 OR10G6Q8NH81 332 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 ACTL9Q8TC94 416 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 BLOC1S5Q8TDH9 187 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 ZMYND15Q9H091 742 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 TRABDQ9H4I3 376 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 SCHIP1Q9P0W5 487 aaPredicted RBP19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 TRHDEQ9UKU6 1024 aa19.03■□□□□ 0.64
SMARCB1-204ENST00000407422 MACROD2A1Z1Q3 448 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 GPR89AB7ZAQ6 455 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 TK2O00142 265 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 GPR39O43194 453 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 GPR89BP0CG08 455 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 LIPCP11150 499 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 CA5AP35218 305 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 ARSDP51689 593 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 CLCNKAP51800 687 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 OTUD4Q01804 1114 aaKnown RBP19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 MPP3Q13368 585 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 TRA2AQ13595 282 aaKnown RBP eCLIP19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 INSCQ1MX18 579 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 SLC9B2Q86UD5 537 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 ALG3Q92685 438 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 VPS35Q96QK1 796 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 OSBPL8Q9BZF1 889 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 IL17CQ9P0M4 197 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 CPNE7Q9UBL6 633 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 DNAJC16Q9Y2G8 782 aa19.02■□□□□ 0.64
SMARCB1-204ENST00000407422 HELZ2Q9BYK8 2649 aaKnown RBP19.02■□□□□ 0.63
SMARCB1-204ENST00000407422 KIR2DS5A0A0G2JLQ3 304 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 A0A0G2JNG1 304 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 GRID2IPA4D2P6 1211 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 BTNL10A8MVZ5 291 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 KIR2DS3K7RE56 304 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 ERVH48-1M5A8F1 160 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 PJA2O43164 708 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 DUX1O43812 170 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 VEGFDO43915 354 aa19.01■□□□□ 0.63
SMARCB1-204ENST00000407422 CDK14O94921 469 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms