RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 SPDYCQ5MJ68 293 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 TEDDM1Q5T9Z0 273 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 PEAR1Q5VY43 1037 aaPredicted RBP8.29□□□□□ -1.08
GPC3-203ENST00000406757 KIAA0930Q6ICG6 404 aaPredicted RBP8.29□□□□□ -1.08
GPC3-203ENST00000406757 NEPROQ6NW34 567 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 PIP4P1Q86T03 277 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 TRIM74Q86UV6 250 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 HORMAD1Q86X24 394 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 CCNJLQ8IV13 435 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 PIANPQ8IYJ0 282 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 OR2T34Q8NGX1 318 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 OR4L1Q8NH43 312 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 ZNF398Q8TD17 642 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 HNRNPLLQ8WVV9 542 aaKnown RBP8.29□□□□□ -1.08
GPC3-203ENST00000406757 ANKRD7Q92527 254 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 SNX19Q92543 992 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 FAM131CQ96AQ9 280 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 AP2M1Q96CW1 435 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 NUS1Q96E22 293 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 DTD2Q96FN9 168 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 ATXN7L3BQ96GX2 97 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 TTC25Q96NG3 672 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 ZIM3Q96PE6 472 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 SRPK1Q96SB4 655 aaKnown RBP8.29□□□□□ -1.08
GPC3-203ENST00000406757 NAT9Q9BTE0 207 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 SPATA16Q9BXB7 569 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 SLC17A9Q9BYT1 436 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 PHACTR1Q9C0D0 580 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 ASB8Q9H765 288 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 EBF2Q9HAK2 575 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 SGK2Q9HBY8 427 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 NPDC1Q9NQX5 325 aaPredicted RBP8.29□□□□□ -1.08
GPC3-203ENST00000406757 FBXO6Q9NRD1 293 aaPredicted RBP8.29□□□□□ -1.08
GPC3-203ENST00000406757 ZNF446Q9NWS9 450 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 MOCS1Q9NZB8 636 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 TMPRSS11EQ9UL52 423 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 FZD4Q9ULV1 537 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 SLC6A14Q9UN76 642 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 NEUROG3Q9Y4Z2 214 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 PSAT1Q9Y617 370 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 SLC30A1Q9Y6M5 507 aa8.29□□□□□ -1.08
GPC3-203ENST00000406757 LRRC72A6NJI9 287 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 FAM159BA6NKW6 160 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 FADS2P1A8MWK0 482 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 OR1I1O60431 355 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 NDUFS2O75306 463 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 SASH3O75995 380 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 HAUS5O94927 633 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 PRAMEF1O95521 474 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 PAMP19021 973 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 GABRB3P28472 473 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 GCAP28676 217 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 OXTRP30559 389 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 FOXN2P32314 431 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 STX2P32856 288 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 PHBP35232 272 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 HADHAP40939 763 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 DPP6P42658 865 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 SLC1A2P43004 574 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 GPR1P46091 355 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 PGGT1BP53609 377 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 RPS21P63220 83 aaKnown RBP8.28□□□□□ -1.08
GPC3-203ENST00000406757 PDE1BQ01064 536 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 SFSWAPQ12872 951 aaKnown RBP8.28□□□□□ -1.08
GPC3-203ENST00000406757 CASP8Q14790 479 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 IRF4Q15306 451 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 FASTKD1Q53R41 847 aaKnown RBP8.28□□□□□ -1.08
GPC3-203ENST00000406757 KIAA0895LQ68EN5 471 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 PDPK2PQ6A1A2 396 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 ZNF470Q6ECI4 717 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 RAET1GQ6H3X3 334 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 AFTPHQ6ULP2 937 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 SLC36A4Q6YBV0 504 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 SLC41A1Q8IVJ1 513 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 CHCHD4Q8N4Q1 142 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 MREGQ8N565 214 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 MINDY1Q8N5J2 469 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 TP53I13Q8NBR0 393 aaPredicted RBP8.28□□□□□ -1.08
GPC3-203ENST00000406757 CEP76Q8TAP6 659 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 EPS8L3Q8TE67 593 aaKnown RBP8.28□□□□□ -1.08
GPC3-203ENST00000406757 HSPA12BQ96MM6 686 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 LENG8Q96PV6 779 aaPredicted RBP8.28□□□□□ -1.08
GPC3-203ENST00000406757 BOCQ9BWV1 1114 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 C1QTNF2Q9BXJ5 285 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 CAAP1Q9H8G2 361 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 CAPN10Q9HC96 672 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 PREBQ9HCU5 417 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 CATSPERZQ9NTU4 200 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 CTNNAL1Q9UBT7 734 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 CRLS1Q9UJA2 301 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 RIMKLBQ9ULI2 386 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 MSRB2Q9Y3D2 182 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 SLCO1B1Q9Y6L6 691 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 TNRC6BQ9UPQ9 1833 aaKnown RBP8.28□□□□□ -1.08
GPC3-203ENST00000406757 SCN8AQ9UQD0 1980 aa8.28□□□□□ -1.08
GPC3-203ENST00000406757 LOC400499M0QZD8 3231 aa8.27□□□□□ -1.09
GPC3-203ENST00000406757 EXOC1LA0A1B0GW35 172 aa8.27□□□□□ -1.09
GPC3-203ENST00000406757 H0Y8X5 98 aa8.27□□□□□ -1.09
GPC3-203ENST00000406757 PSMD11O00231 422 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms