RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 LMAN2LQ9H0V9 348 aa9.03□□□□□ -0.96
LIG4-202ENST00000405925 FETUBQ9UGM5 382 aa9.03□□□□□ -0.96
LIG4-202ENST00000405925 LZTS1Q9Y250 596 aa9.03□□□□□ -0.96
LIG4-202ENST00000405925 KIAA1217Q5T5P2 1943 aa9.03□□□□□ -0.96
LIG4-202ENST00000405925 GSAPA4D1B5 854 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 TNFRSF10BO14763 440 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 STK16O75716 305 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 PGLSO95336 258 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 ABCB1P08183 1280 aaPredicted RBP9.02□□□□□ -0.96
LIG4-202ENST00000405925 VIPR1P32241 457 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 POLD2P49005 469 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 ARL13AQ5H913 290 aaPredicted RBP9.02□□□□□ -0.96
LIG4-202ENST00000405925 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 GAREM2Q75VX8 874 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 RRM2BQ7LG56 351 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 ZC3HC1Q86WB0 502 aaKnown RBP9.02□□□□□ -0.96
LIG4-202ENST00000405925 SYT12Q8IV01 421 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 HID1Q8IV36 788 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 CLYBLQ8N0X4 340 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 TAGAPQ8N103 731 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 MIER2Q8N344 545 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 GPR156Q8NFN8 814 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 FIBINQ8TAL6 211 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 DCAKDQ8WVC6 231 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 KHSRPQ92945 711 aaKnown RBP eCLIP9.02□□□□□ -0.96
LIG4-202ENST00000405925 ZNF778Q96MU6 729 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 KIFC1Q9BW19 673 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 MYLK2Q9H1R3 596 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 KLC4Q9NSK0 619 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 NDOR1Q9UHB4 597 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 TMCO1Q9UM00 188 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 NDUFAF1Q9Y375 327 aa9.02□□□□□ -0.96
LIG4-202ENST00000405925 HHLA1C9JL84 531 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 MRASO14807 208 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 SOCS5O75159 536 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 IVDP26440 423 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 HPCAP84074 193 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 TRAF2Q12933 501 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 CYP51A1Q16850 503 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 KRT78Q8N1N4 520 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 KYQ8NBH2 561 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 ITFG1Q8TB96 612 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 SCAMP4Q969E2 229 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 ABHD8Q96I13 439 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 HBEGFQ99075 208 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 TTLL2Q9BWV7 592 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 SLC2A11Q9BYW1 496 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 MTG2Q9H4K7 406 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 RETREG1Q9H6L5 497 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 DNMT3BQ9UBC3 853 aaKnown RBP9.02□□□□□ -0.97
LIG4-202ENST00000405925 TRAF6Q9Y4K3 522 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 NME7Q9Y5B8 376 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 TCRBV5S1A1TA0A578 114 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 TTC34A8MYJ7 566 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 FOSL2P15408 326 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 EEF1B2P24534 225 aaKnown RBP9.02□□□□□ -0.97
LIG4-202ENST00000405925 RPL26P61254 145 aaKnown RBP9.02□□□□□ -0.97
LIG4-202ENST00000405925 RPL38P63173 70 aaKnown RBP9.02□□□□□ -0.97
LIG4-202ENST00000405925 IRF9Q00978 393 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 EIF4HQ15056 248 aaKnown RBP9.02□□□□□ -0.97
LIG4-202ENST00000405925 ACAP2Q15057 778 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 AASDHQ4L235 1098 aaPredicted RBP9.02□□□□□ -0.97
LIG4-202ENST00000405925 PIM3Q86V86 326 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 BANPQ8N9N5 519 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 OLFM3Q96PB7 478 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 C1orf50Q9BV19 199 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 WDR55Q9H6Y2 383 aaPredicted RBP9.02□□□□□ -0.97
LIG4-202ENST00000405925 WDR26Q9H7D7 661 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 ZDHHC3Q9NYG2 299 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 GULP1Q9UBP9 304 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 LIMD1Q9UGP4 676 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 RPL26L1Q9UNX3 145 aaKnown RBP9.02□□□□□ -0.97
LIG4-202ENST00000405925 TIMM22Q9Y584 194 aa9.02□□□□□ -0.97
LIG4-202ENST00000405925 PSMD12O00232 456 aaPredicted RBP9.01□□□□□ -0.97
LIG4-202ENST00000405925 FPGTO14772 594 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 LINC00032P0C843 101 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 HOXC8P31273 242 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 LDLRAP1Q5SW96 308 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 C9orf50Q5SZB4 431 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 TMPRSS11BQ86T26 416 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 LZICQ8WZA0 190 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 UBE2E3Q969T4 207 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 MAGED4Q96JG8 741 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 GBP5Q96PP8 586 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 TDRD1Q9BXT4 1180 aaKnown RBP9.01□□□□□ -0.97
LIG4-202ENST00000405925 DPEP2Q9H4A9 486 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 HSFX1Q9UBD0 423 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 RAB23Q9ULC3 237 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 FAM32AQ9Y421 112 aaKnown RBP9.01□□□□□ -0.97
LIG4-202ENST00000405925 C16orf96A6NNT2 1141 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 H0Y858 1186 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 TCEA3O75764 348 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 ABLIM3O94929 683 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 PDHA1P08559 390 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 ARSAP15289 507 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 ZNF30P17039 623 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 CXCR2P25025 360 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 ELAVL3Q14576 367 aaKnown RBP9.01□□□□□ -0.97
LIG4-202ENST00000405925 TRIP10Q15642 601 aa9.01□□□□□ -0.97
LIG4-202ENST00000405925 CAPN13Q6MZZ7 669 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms