RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TRIM73Q86UV7 250 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 KLHDC8BQ8IXV7 354 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 MINDY1Q8N5J2 469 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 EEF1AKMT1Q8WVE0 214 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 FIG4Q92562 907 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 SEPT8Q92599 483 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 CCDC97Q96F63 343 aaPredicted RBP11.89□□□□□ -0.51
RBM39-206ENST00000403542 SMURF2Q9HAU4 748 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 ABCD2Q9UBJ2 740 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 TRPV2Q9Y5S1 764 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 SQORQ9Y6N5 450 aa11.89□□□□□ -0.51
RBM39-206ENST00000403542 AQP12BA6NM10 295 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 PRKACGP22612 351 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 DNAJB1P25685 340 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 MAP4P27816 1152 aaKnown RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 HOXC13P31276 330 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 OR1G1P47890 313 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 POLR2JP52435 117 aaKnown RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 CREB5Q02930 508 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 BFSP2Q13515 415 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 C16orf87Q6PH81 154 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 SNX29P2Q8IUI4 249 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 AQP12AQ8IXF9 295 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 ABI1Q8IZP0 508 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 CDKN2AIPNLQ96HQ2 116 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 ARNT2Q9HBZ2 717 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 TMEM165Q9HC07 324 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 ATP13A1Q9HD20 1204 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 CHCHD3Q9NX63 227 aaKnown RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 IFT80Q9P2H3 777 aaPredicted RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 AASSQ9UDR5 926 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 WARS2Q9UGM6 360 aaKnown RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 SUN2Q9UH99 717 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 ZNF236Q9UL36 1845 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 UNC80Q8N2C7 3258 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 C1orf232A0A0U1RR37 186 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 A0A1W2PP18 115 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 H0YJX3 145 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 FFAR3O14843 346 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 GPR182O15218 404 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 GPR42O15529 346 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 ATP6V1G1O75348 118 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 ZNF189O75820 626 aaPredicted RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 ZBTB11O95625 1053 aaPredicted RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 IDO1P14902 403 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 HRH2P25021 359 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 SHMT2P34897 504 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 CAPGP40121 348 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 STC1P52823 247 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 TPD52P55327 224 aaPredicted RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 NUP107P57740 925 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 TUBA4AP68366 448 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 SLC14A2Q15849 920 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 SETMARQ53H47 684 aaPredicted RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 AFMIDQ63HM1 303 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 GLYATQ6IB77 296 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 LCN8Q6JVE9 175 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 PSAPL1Q6NUJ1 521 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 MSANTD2Q6P1R3 559 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 MILR1Q7Z6M3 343 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 CLHC1Q8NHS4 586 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 FUBP1Q96AE4 644 aaKnown RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 PKMYT1Q99640 499 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 SEPT5Q99719 369 aaPredicted RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 AARSD1Q9BTE6 412 aaKnown RBP11.88□□□□□ -0.51
RBM39-206ENST00000403542 CCSER2Q9H7U1 834 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 MED16Q9Y2X0 877 aa11.88□□□□□ -0.51
RBM39-206ENST00000403542 FAM155AB1AL88 458 aaPredicted RBP11.87□□□□□ -0.51
RBM39-206ENST00000403542 PTGES3LE9PB15 166 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 RPP40O75818 363 aaKnown RBP11.87□□□□□ -0.51
RBM39-206ENST00000403542 RASAL1O95294 804 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 ALBP02768 609 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 HSD17B1P14061 328 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 PBX3P40426 434 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 IL1RL1Q01638 556 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 GALNT1Q10472 559 aaPredicted RBP11.87□□□□□ -0.51
RBM39-206ENST00000403542 LAPTM4AQ15012 233 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 ZRANB3Q5FWF4 1079 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 TMTC4Q5T4D3 741 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 INTS11Q5TA45 600 aaKnown RBP11.87□□□□□ -0.51
RBM39-206ENST00000403542 IL27RAQ6UWB1 636 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 PATL1Q86TB9 770 aaKnown RBP11.87□□□□□ -0.51
RBM39-206ENST00000403542 UMODL1-AS1Q8N2C9 162 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 LPCAT1Q8NF37 534 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 STAG3L4Q8TBR4 150 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 GIPC2Q8TF65 315 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 ZUFSPQ96AP4 578 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 FEM1CQ96JP0 617 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 SEZ6LQ9BYH1 1024 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 POLR1EQ9GZS1 481 aaKnown RBP11.87□□□□□ -0.51
RBM39-206ENST00000403542 CCDC90BQ9GZT6 254 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 XIRP2A4UGR9 3374 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 BBIP1A8MTZ0 92 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 TOR1BO14657 336 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 WISP3O95389 354 aaPredicted RBP11.87□□□□□ -0.51
RBM39-206ENST00000403542 G6PDP11413 515 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 RHOQP17081 205 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 RPL9P32969 192 aaKnown RBP11.87□□□□□ -0.51
RBM39-206ENST00000403542 HK3P52790 923 aa11.87□□□□□ -0.51
RBM39-206ENST00000403542 MAP2K5Q13163 448 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms