RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CCRL2O00421 344 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 DPYSL4O14531 572 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 GSNP06396 782 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 GPIP06744 558 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 TPI1P60174 286 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 CLPPQ16740 277 aaPredicted RBP16.96■□□□□ 0.31
PTPRA-205ENST00000399903 ADPRMQ3LIE5 342 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 SLC16A12Q6ZSM3 486 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 COLGALT2Q8IYK4 626 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 TTC30BQ8N4P2 665 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 FIG4Q92562 907 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 PPM1MQ96MI6 270 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 SCUBE2Q9NQ36 999 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 TIMM22Q9Y584 194 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 PLXNA1Q9UIW2 1896 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 CPB1P15086 417 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 GPX3P22352 226 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 FMO3P31513 532 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 MTHFRP42898 656 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 NDUFV1P49821 464 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 FOXA1P55317 472 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 RACK1P63244 317 aaKnown RBP16.96■□□□□ 0.31
PTPRA-205ENST00000399903 SKIV2LQ15477 1246 aaKnown RBP16.96■□□□□ 0.31
PTPRA-205ENST00000399903 FAM214AQ32MH5 1076 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 NOMO2Q5JPE7 1267 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 C6orf141Q5SZD1 244 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 BTBD8Q5XKL5 378 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 GALNT5Q7Z7M9 940 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 ZDHHC13Q8IUH4 622 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 LILRB4Q8NHJ6 448 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 DUS3LQ96G46 650 aaKnown RBP16.96■□□□□ 0.31
PTPRA-205ENST00000399903 GPR78Q96P69 363 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 PSD2Q9BQI7 771 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 REXO4Q9GZR2 422 aaKnown RBP16.96■□□□□ 0.31
PTPRA-205ENST00000399903 RMND5AQ9H871 391 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 DFFAO00273 331 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 NAT1P18440 290 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 CD68P34810 354 aaPredicted RBP16.96■□□□□ 0.31
PTPRA-205ENST00000399903 PIGAP37287 484 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 KCNK10P57789 538 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 CDH17Q12864 832 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 UGP2Q16851 508 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 LCN8Q6JVE9 175 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 CYP2U1Q7Z449 544 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 MICU2Q8IYU8 434 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 BEST2Q8NFU1 509 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 OR10Q1Q8NGQ4 319 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 SLC7A14Q8TBB6 771 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 CASS4Q9NQ75 786 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 INTS7Q9NVH2 962 aaKnown RBP16.96■□□□□ 0.31
PTPRA-205ENST00000399903 ENPP5Q9UJA9 477 aa16.96■□□□□ 0.31
PTPRA-205ENST00000399903 CAB39Q9Y376 341 aaPredicted RBP16.96■□□□□ 0.31
PTPRA-205ENST00000399903 BEST1O76090 585 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 FADS2O95864 444 aaKnown RBP16.95■□□□□ 0.3
PTPRA-205ENST00000399903 GSTM2P28161 218 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 CLK3P49761 638 aaKnown RBP16.95■□□□□ 0.3
PTPRA-205ENST00000399903 HNRNPFP52597 415 aaKnown RBP16.95■□□□□ 0.3
PTPRA-205ENST00000399903 OR4D2P58180 307 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 ADIGQ0VDE8 80 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 TUBA3CQ13748 450 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 ACAP2Q15057 778 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 GLYATQ6IB77 296 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 CXCL17Q6UXB2 119 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 OR6P1Q8NGX9 317 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 ZNF641Q96N77 438 aaPredicted RBP16.95■□□□□ 0.3
PTPRA-205ENST00000399903 FICDQ9BVA6 458 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 PCDHGA11Q9Y5H2 935 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 FXYD1O00168 92 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 SPNP16150 400 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 GLUD2P49448 558 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 KPNA2P52292 529 aaKnown RBP16.95■□□□□ 0.3
PTPRA-205ENST00000399903 CD47Q08722 323 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 INCA1Q0VD86 236 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 DAG1Q14118 895 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 LAPTM4AQ15012 233 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 LRIT3Q3SXY7 679 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 UGT3A2Q3SY77 523 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 FBXO47Q5MNV8 452 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 AGAP9Q5VTM2 703 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 DEPDC4Q8N2C3 294 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 NUDT8Q8WV74 236 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 ASPSCR1Q9BZE9 553 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 PLXNB2O15031 1838 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 UGT2B11O75310 529 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 BMPR1AP36894 532 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 CHRNA4P43681 627 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 PSEN2P49810 448 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 GP2P55259 537 aaKnown RBP16.95■□□□□ 0.3
PTPRA-205ENST00000399903 MTPNP58546 118 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 YWHAHQ04917 246 aaPredicted RBP16.95■□□□□ 0.3
PTPRA-205ENST00000399903 ILF2Q12905 390 aaKnown RBP16.95■□□□□ 0.3
PTPRA-205ENST00000399903 DPY19L1Q2PZI1 675 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 PAGE3Q5JUK9 113 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 MCFD2Q8NI22 146 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 HASPINQ8TF76 798 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 SLC35F5Q8WV83 523 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 NSUN5Q96P11 429 aaKnown RBP16.95■□□□□ 0.3
PTPRA-205ENST00000399903 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
PTPRA-205ENST00000399903 HOXD1Q9GZZ0 328 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms