RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SLC2A4P14672 509 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 ZNF8P17098 575 aaPredicted RBP13.26□□□□□ -0.29
VCX3A-202ENST00000398729 BPIP17213 487 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 CD1CP29017 333 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 SLC5A2P31639 672 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 CETN2P41208 172 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 ATP5OP48047 213 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 MPP3Q13368 585 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 NOMO1Q15155 1222 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 KDELC1Q6UW63 502 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 RAD9BQ6WBX8 426 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 PHYKPLQ8IUZ5 450 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 SFRP1Q8N474 314 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 SLC37A2Q8TED4 501 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 GLYATL1Q969I3 302 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 PLEKHG4BQ96PX9 1271 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 SLC38A3Q99624 504 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 NUDT22Q9BRQ3 303 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 HERPUD2Q9BSE4 406 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 OR2AG1Q9H205 316 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 TRABDQ9H4I3 376 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 STN1Q9H668 368 aaKnown RBP13.26□□□□□ -0.29
VCX3A-202ENST00000398729 ARFGAP3Q9NP61 516 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 KCNK4Q9NYG8 393 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 RSPH14Q9UHP6 348 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 KCNK6Q9Y257 313 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 REXO2Q9Y3B8 237 aaKnown RBP13.26□□□□□ -0.29
VCX3A-202ENST00000398729 SPO11Q9Y5K1 396 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 PCYT1BQ9Y5K3 369 aaPredicted RBP13.26□□□□□ -0.29
VCX3A-202ENST00000398729 DUSP10Q9Y6W6 482 aa13.26□□□□□ -0.29
VCX3A-202ENST00000398729 SCN8AQ9UQD0 1980 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 RELNP78509 3460 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 TRBV23OR9-2A0A075B6M9 112 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 NBPF19A0A087WUL8 3843 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 IGHV1OR21-1A0A087WYE8 117 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 MACROD2A1Z1Q3 448 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 AGRPO00253 132 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 AURKAO14965 403 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 NVLO15381 856 aaKnown RBP13.25□□□□□ -0.29
VCX3A-202ENST00000398729 SLC28A2O43868 658 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 ITIH1P19827 911 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 HLA-DPA1P20036 260 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 CTNNA2P26232 953 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 RBL1P28749 1068 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 HMGCLP35914 325 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 PPM1FP49593 454 aaPredicted RBP13.25□□□□□ -0.29
VCX3A-202ENST00000398729 VAV2P52735 878 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 RWDD2BP57060 319 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 GPLD1P80108 840 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 HHEXQ03014 270 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 SQSTM1Q13501 440 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 SLC1A5Q15758 541 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 SIRPB2Q5JXA9 342 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 NKAIN2Q5VXU1 208 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 IYDQ6PHW0 289 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 KIAA1328Q86T90 577 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 SLC25A41Q8N5S1 370 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 ACRBPQ8NEB7 543 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 IPMKQ8NFU5 416 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 OR4D9Q8NGE8 314 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 OR10G6Q8NH81 332 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 AHCYL2Q96HN2 611 aaKnown RBP13.25□□□□□ -0.29
VCX3A-202ENST00000398729 OXNAD1Q96HP4 312 aaPredicted RBP13.25□□□□□ -0.29
VCX3A-202ENST00000398729 MRGPRX2Q96LB1 330 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 BAG1Q99933 345 aaPredicted RBP13.25□□□□□ -0.29
VCX3A-202ENST00000398729 DPYSL5Q9BPU6 564 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 FSD1LQ9BXM9 530 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 OSBPL8Q9BZF1 889 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 ZMYND15Q9H091 742 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 BPIFA1Q9NP55 256 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 HACD3Q9P035 362 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 TBC1D29Q9UFV1 150 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 NBASA2RRP1 2371 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 DOPEY2Q9Y3R5 2298 aa13.25□□□□□ -0.29
VCX3A-202ENST00000398729 KIR2DS5A0A0G2JLQ3 304 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 A0A0G2JNG1 304 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 IGHV5-10-1A0A0J9YXX1 117 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 OR5K4A6NMS3 321 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 F5H423 210 aaPredicted RBP13.24□□□□□ -0.29
VCX3A-202ENST00000398729 KIR2DS3K7RE56 304 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 HGSO14964 777 aaPredicted RBP13.24□□□□□ -0.29
VCX3A-202ENST00000398729 PJA2O43164 708 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 VEGFDO43915 354 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 SNX2O60749 519 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 EML2O95834 649 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 F3P13726 295 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 PTPN7P35236 360 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 CLCNKAP51800 687 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 LIMK2P53671 638 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 MAPK10P53779 464 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 OTUD4Q01804 1114 aaKnown RBP13.24□□□□□ -0.29
VCX3A-202ENST00000398729 SRSF1Q07955 248 aaKnown RBP eCLIP13.24□□□□□ -0.29
VCX3A-202ENST00000398729 CLN3Q13286 438 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 TRA2AQ13595 282 aaKnown RBP eCLIP13.24□□□□□ -0.29
VCX3A-202ENST00000398729 KIR2DS5Q14953 304 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 C16orf72Q14CZ0 275 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 ZNF648Q5T619 568 aaPredicted RBP13.24□□□□□ -0.29
VCX3A-202ENST00000398729 TMEM164Q5U3C3 297 aa13.24□□□□□ -0.29
VCX3A-202ENST00000398729 ZDHHC20Q5W0Z9 365 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms