RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PPCDCQ96CD2 204 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 CDKN2AIPNLQ96HQ2 116 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 SGK2Q9HBY8 427 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 OXSMQ9NWU1 459 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 KLHL3Q9UH77 587 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 ZNF232Q9UNY5 417 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 COPG1Q9Y678 874 aaKnown RBP14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 SLC22A2O15244 555 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 DNTTP04053 509 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 UQCRBP14927 111 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 KELP23276 732 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 NAE1Q13564 534 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 LPIN1Q14693 890 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 PLEKHM3Q6ZWE6 761 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 CPA6Q8N4T0 437 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 UBR7Q8N806 425 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 OR13C4Q8NGS5 318 aa14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 RPL10LQ96L21 214 aaKnown RBP14.12□□□□□ -0.15
PCDHGA11-201ENST00000398587 ISM1B1AKI9 464 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 OR4F21O95013 312 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 ASMTP46597 345 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 RALGDSQ12967 914 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 MRPL28Q13084 256 aaKnown RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 CBX2Q14781 532 aaPredicted RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 CPTPQ5TA50 214 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 OFCC1Q8IZS5 231 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 OR2T34Q8NGX1 318 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 OR2T3Q8NH03 318 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 C8orf4Q9NR00 106 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 DDX18Q9NVP1 670 aaKnown RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 POLR3BQ9NW08 1133 aaPredicted RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 RBM47A0AV96 593 aaKnown RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 URADA6NGE7 173 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 IGFBP4P22692 258 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 SMIM11AP58511 58 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 CAP1Q01518 475 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 GTF2H2Q13888 395 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 DPYSQ14117 519 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 FBXO48Q5FWF7 155 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 GTF2H2CQ6P1K8 395 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 CHSY3Q70JA7 882 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 ZC3HC1Q86WB0 502 aaKnown RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 KIAA2013Q8IYS2 634 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 PIWIL1Q96J94 861 aaKnown RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 TCF25Q9BQ70 676 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 EIF2B4Q9UI10 523 aaKnown RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 SAMHD1Q9Y3Z3 626 aaKnown RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 GMPPBQ9Y5P6 360 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 ARL5AQ9Y689 179 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 PGM3O95394 542 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 APODP05090 189 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 CAPN1P07384 714 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 PAICSP22234 425 aaKnown RBP14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 GPR33Q49SQ1 333 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 BROXQ5VW32 411 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 GLYATQ6IB77 296 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 CLHC1Q8NHS4 586 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 COL26A1Q96A83 441 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 EBF4Q9BQW3 602 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 ATG10Q9H0Y0 220 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 J3KR12 359 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 TRBC1P01850 177 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 PROZP22891 400 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 NOS3P29474 1203 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 MIEF2Q96C03 454 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 ROPN1LQ96C74 230 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 SQORQ9Y6N5 450 aa14.11□□□□□ -0.15
PCDHGA11-201ENST00000398587 PIP5K1BO14986 540 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 TIPRLO75663 272 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 CHRNGP07510 517 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 NR2F1P10589 423 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 MYL12AP19105 171 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 SLC11A1P49279 550 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 KCNQ1P51787 676 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 CDC42P60953 191 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 IRF9Q00978 393 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 LPCAT4Q643R3 524 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 TIFABQ6ZNK6 161 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 TMPRSS11BQ86T26 416 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 ZCCHC7Q8N3Z6 543 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 SIDT2Q8NBJ9 832 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 FERD3LQ96RJ6 166 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 GPR22Q99680 433 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 SLC28A3Q9HAS3 691 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 GEMIN8Q9NWZ8 242 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 ADGRE2Q9UHX3 823 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 NEMP2A6NFY4 417 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 CSKP41240 450 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 CYP4F8P98187 520 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 IRF5Q13568 498 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 HLA-DQA1Q5Y7H0 255 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 REXO5Q96IC2 774 aaKnown RBP14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 KLHL32Q96NJ5 620 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 AIF1LQ9BQI0 150 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 RHBGQ9H310 441 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 DNAJC25-GNG10A0A024R161 153 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 OR51F1A6NGY5 319 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 OR2AG2A6NM03 316 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 H0Y858 1186 aa14.1□□□□□ -0.15
PCDHGA11-201ENST00000398587 ERAL1O75616 437 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms