RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 SGF29Q96ES7 293 aa18.21■□□□□ 0.51
MBD1-208ENST00000398493 PRR11Q96HE9 360 aaPredicted RBP18.21■□□□□ 0.51
MBD1-208ENST00000398493 C2orf42Q9NWW7 574 aa18.21■□□□□ 0.51
MBD1-208ENST00000398493 CACNA2D2Q9NY47 1150 aa18.21■□□□□ 0.51
MBD1-208ENST00000398493 THAP10Q9P2Z0 257 aaPredicted RBP18.21■□□□□ 0.51
MBD1-208ENST00000398493 CUL9Q8IWT3 2517 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 H7C0S8 307 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 SMAD6O43541 496 aaKnown RBP18.2■□□□□ 0.5
MBD1-208ENST00000398493 SMIM24O75264 130 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 RHOBTB1O94844 696 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 PGLSO95336 258 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 ENO1P06733 434 aaKnown RBP18.2■□□□□ 0.5
MBD1-208ENST00000398493 TFEBP19484 476 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 MC4RP32245 332 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 PPARGP37231 505 aaPredicted RBP18.2■□□□□ 0.5
MBD1-208ENST00000398493 IL12RB1P42701 662 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 TUBB3Q13509 450 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 ZNF549Q6P9A3 640 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 ATG14Q6ZNE5 492 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 NUDT18Q6ZVK8 323 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 TMPRSS6Q8IU80 811 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 TTC30BQ8N4P2 665 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 IL17RCQ8NAC3 791 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 RPLP0P6Q8NHW5 317 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 STON2Q8WXE9 905 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 ERLEC1Q96DZ1 483 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 NELL2Q99435 816 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 C19orf43Q9BQ61 176 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 TM6SF2Q9BZW4 377 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 UNKQ9C0B0 810 aaKnown RBP18.2■□□□□ 0.5
MBD1-208ENST00000398493 MTG2Q9H4K7 406 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 ATP13A3Q9H7F0 1226 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 SIT1Q9Y3P8 196 aa18.2■□□□□ 0.5
MBD1-208ENST00000398493 ANKRD36A6QL64 1941 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 ZDBF2Q9HCK1 2354 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 MATN2O00339 956 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 SOCS5O75159 536 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 WISP3O95389 354 aaPredicted RBP18.19■□□□□ 0.5
MBD1-208ENST00000398493 HLA-EP13747 358 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 AOC1P19801 751 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 SNRPD1P62314 119 aaKnown RBP18.19■□□□□ 0.5
MBD1-208ENST00000398493 ZRANB3Q5FWF4 1079 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 MAVSQ7Z434 540 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 ANKRD49Q8WVL7 239 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 MCUR1Q96AQ8 359 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 EVLQ9UI08 416 aaPredicted RBP18.19■□□□□ 0.5
MBD1-208ENST00000398493 PLA2G4CQ9UP65 541 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 ZNF711Q9Y462 761 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 COMMD10Q9Y6G5 202 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 SLC30A1Q9Y6M5 507 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 GOLGA8CPA6NN73 597 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 TTC34A8MYJ7 566 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 B2RBV5 119 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 ADAM23O75077 832 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 CHRNGP07510 517 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 TPBGLP0DKB5 382 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 SRCP12931 536 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 HNRNPLP14866 589 aaKnown RBP eCLIP18.19■□□□□ 0.5
MBD1-208ENST00000398493 EZRP15311 586 aaKnown RBP18.19■□□□□ 0.5
MBD1-208ENST00000398493 NCF2P19878 526 aaPredicted RBP18.19■□□□□ 0.5
MBD1-208ENST00000398493 MPSTP25325 297 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 FMO4P31512 558 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 SULT2A1Q06520 285 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 FBXO43Q4G163 708 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 DGKKQ5KSL6 1271 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 ACAD11Q709F0 780 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 CHPFQ8IZ52 775 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 STK40Q8N2I9 435 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 TEX9Q8N6V9 391 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 PNPLA1Q8N8W4 532 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 TXNDC5Q8NBS9 432 aaKnown RBP18.19■□□□□ 0.5
MBD1-208ENST00000398493 LPGAT1Q92604 370 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 CLDN23Q96B33 292 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 FAR2Q96K12 515 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 TTC1Q99614 292 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 TMEM245Q9H330 911 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 C11orf16Q9NQ32 467 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 DLGAP2Q9P1A6 1054 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 FKBPLQ9UIM3 349 aa18.19■□□□□ 0.5
MBD1-208ENST00000398493 ZNF821O75541 412 aaPredicted RBP18.18■□□□□ 0.5
MBD1-208ENST00000398493 ASLP04424 464 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 SERPINA4P29622 427 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 HMGCLP35914 325 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 RAD51Q06609 339 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 TMEM207Q6UWW9 146 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 RAB44Q7Z6P3 723 aaPredicted RBP18.18■□□□□ 0.5
MBD1-208ENST00000398493 ISCA2Q86U28 154 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 CAMK1DQ8IU85 385 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 RYBPQ8N488 228 aaPredicted RBP18.18■□□□□ 0.5
MBD1-208ENST00000398493 RHEBL1Q8TAI7 183 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 UCMAQ8WVF2 138 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 PIH1D2Q8WWB5 315 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 ISG20Q96AZ6 181 aaKnown RBP18.18■□□□□ 0.5
MBD1-208ENST00000398493 TRMOQ9BU70 441 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 OSBPL6Q9BZF3 934 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 TFB2MQ9H5Q4 396 aaKnown RBP18.18■□□□□ 0.5
MBD1-208ENST00000398493 ALG9Q9H6U8 611 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 BPIFA1Q9NP55 256 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 TCF7L2Q9NQB0 619 aa18.18■□□□□ 0.5
MBD1-208ENST00000398493 TAS2R1Q9NYW7 299 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms