RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SPCS2Q15005 226 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 PAN2Q504Q3 1202 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 BROXQ5VW32 411 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 SLX4IPQ5VYV7 408 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 UGT3A1Q6NUS8 523 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 CHST15Q7LFX5 561 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 GALNT13Q8IUC8 556 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 CCDC117Q8IWD4 279 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 DDIASQ8IXT1 998 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 PTERQ96BW5 349 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 FCRL2Q96LA5 508 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 KCNA7Q96RP8 456 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 GAD1Q99259 594 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 OAZ3Q9UMX2 235 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 DNAJC15Q9Y5T4 150 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 DYTNA2CJ06 578 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 CASTOR2A6NHX0 329 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 PIP5K1BO14986 540 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 RASAL1O95294 804 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 PSEN2P49810 448 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 ARSDP51689 593 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 CDC20Q12834 499 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 INPP5AQ14642 412 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 TFAP2DQ7Z6R9 452 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 ISCA2Q86U28 154 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 IFNEQ86WN2 208 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 DCP2Q8IU60 420 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 RAVER1Q8IY67 606 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 CMTR2Q8IYT2 770 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 SFRP1Q8N474 314 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 OR13J1Q8NGT2 312 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 MED30Q96HR3 178 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 PAAF1Q9BRP4 392 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 SEZ6LQ9BYH1 1024 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 MID1IP1Q9NPA3 183 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 CMTM6Q9NX76 183 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 MARCH4Q9P2E8 410 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 PCDHGA3Q9Y5H0 932 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 PTCH2Q9Y6C5 1203 aa15.87■□□□□ 0.13
CHMP1A-201ENST00000397901 A6NL46 340 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 GOLGA8CPA6NN73 597 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 AREL1O15033 823 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 IL10P22301 178 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 EEF1B2P24534 225 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 PSMA4P25789 261 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 YAP1P46937 504 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 KRT6CP48668 564 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 SERPINH1P50454 418 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 ATP4BP51164 291 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 GALNT1Q10472 559 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 UGT3A2Q3SY77 523 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 SIGIRRQ6IA17 410 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 TAS2R42Q7RTR8 314 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 SPRED1Q7Z699 444 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 CILP2Q8IUL8 1156 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 PTGR2Q8N8N7 351 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 LPPQ93052 612 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 TRIM15Q9C019 465 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 LHPPQ9H008 270 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 CATSPERBQ9H7T0 1116 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 CPNE5Q9HCH3 593 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 NT5MQ9NPB1 228 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 AGPAT4Q9NRZ5 378 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 TBC1D13Q9NVG8 400 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 MTRRQ9UBK8 725 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 CDH9Q9ULB4 789 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 BTRCQ9Y297 605 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 PCDHGA11Q9Y5H2 935 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 FAM172BPA6NC97 362 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 ASNA1O43681 348 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 MTHFD1P11586 935 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 FASP25445 335 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 CD86P42081 329 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 NR4A2P43354 598 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 PGFP49763 221 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 TMTC4Q5T4D3 741 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 KDELC1Q6UW63 502 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 RNF19BQ6ZMZ0 732 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 SLC22A16Q86VW1 577 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 ARMC8Q8IUR7 673 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 LRRC49Q8IUZ0 686 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 CLYBLQ8N0X4 340 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 MIER2Q8N344 545 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 CLIP4Q8N3C7 705 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 TWIST2Q8WVJ9 160 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 HDAC10Q969S8 669 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 ZUFSPQ96AP4 578 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 NSUN5Q96P11 429 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 KLHL5Q96PQ7 755 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 TRMOQ9BU70 441 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 RNF38Q9H0F5 515 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 SOX17Q9H6I2 414 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 PCDH12Q9NPG4 1184 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 CRNNQ9UBG3 495 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 KCTD3Q9Y597 815 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 DGKBQ9Y6T7 804 aa15.86■□□□□ 0.13
CHMP1A-201ENST00000397901 BBIP1A8MTZ0 92 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 FXYD1O00168 92 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 IRAK2O43187 625 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms