RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CCDC97Q96F63 343 aaPredicted RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 BEGAINQ9BUH8 593 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 BOCQ9BWV1 1114 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 MRM3Q9HC36 420 aaKnown RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 VCX3AQ9NNX9 186 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 MARCH5Q9NX47 278 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 BCAS2O75934 225 aaPredicted RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 LRATO95237 230 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 CLDN7O95471 211 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 PRAMEF12O95522 483 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 CAPN3P20807 821 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 POLD2P49005 469 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 TTPAP49638 278 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLC5A9Q2M3M2 681 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 CNPY1Q3B7I2 92 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 ADGRF1Q5T601 910 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 TTC33Q6PID6 262 aaPredicted RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 MBOAT1Q6ZNC8 495 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 CLEC4FQ8N1N0 589 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 NAT16Q8N8M0 369 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 OR10Q1Q8NGQ4 319 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 FBXO30Q8TB52 745 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 TRIM15Q9C019 465 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 RIC8BQ9NVN3 520 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 IKZF3Q9UKT9 509 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 USP22Q9UPT9 525 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 A0A1B0GTW7 788 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 DHRS12A0PJE2 317 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 GSNP06396 782 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 XPAP23025 273 aaPredicted RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 HOXD9P28356 352 aaPredicted RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 EPHB3P54753 998 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 DNAJB13P59910 316 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 NOGQ13253 232 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 PLCL1Q15111 1095 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 ANGPTL8Q6UXH0 198 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 RETREG3Q86VR2 466 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 SERPINA9Q86WD7 417 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 NKAPQ8N5F7 415 aaKnown RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 PYCR2Q96C36 320 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 UBXN10Q96LJ8 280 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 CASD1Q96PB1 797 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZBTB18Q99592 522 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 TRMOQ9BU70 441 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 NSUN3Q9H649 340 aaKnown RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLAMF8Q9P0V8 285 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 LSM7Q9UK45 103 aaKnown RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 SBF1O95248 1867 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 LOC285095A0A1B0GVY8 99 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 SEC22BO75396 215 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 E2F6O75461 281 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLC22A3O75751 556 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ITGALP20701 1170 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 FDXRP22570 491 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 RGS4P49798 205 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLC2A7Q6PXP3 512 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 SYVN1Q86TM6 617 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 DLG3Q92796 817 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 PSKH2Q96QS6 385 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLC29A1Q99808 456 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 CORO1BQ9BR76 489 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZDHHC6Q9H6R6 413 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ACTR8Q9H981 624 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 MEAF6Q9HAF1 191 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ARNT2Q9HBZ2 717 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 CFAP97Q9P2B7 532 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 YIPF1Q9Y548 306 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 SMAD6O43541 496 aaKnown RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 CACNG3O60359 315 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 PAPSS2O95340 614 aaPredicted RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 CYBBP04839 570 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 EFNA1P20827 205 aaPredicted RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 MAGEA11P43364 429 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 HTR6P50406 440 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 HK2P52789 917 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 TAF1AQ15573 450 aaPredicted RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 TRIM71Q2Q1W2 868 aaKnown RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 FOXB2Q5VYV0 432 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 CACUL1Q86Y37 369 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 MRPS31Q92665 395 aaKnown RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ASB9Q96DX5 294 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 PRICKLE1Q96MT3 831 aaPredicted RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 DCUN1D5Q9BTE7 237 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 MRPL9Q9BYD2 267 aaKnown RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ADNPQ9H2P0 1102 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 IPPKQ9H8X2 491 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZFYVE1Q9HBF4 777 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 UBAP1Q9NZ09 502 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 CNOT6Q9ULM6 557 aaKnown RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ASB1Q9Y576 335 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 KRT87PA6NCN2 255 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 MROH6A6NGR9 719 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 PRMT5O14744 637 aaPredicted RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ACRP10323 421 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZNF7P17097 686 aaPredicted RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 ATP6V1B2P21281 511 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 FASP25445 335 aa10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 PBLDP30039 288 aaPredicted RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 STK19P49842 368 aaPredicted RBP10.34□□□□□ -0.75
CPSF1P1-201ENST00000397477 LIPEQ05469 1076 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms