RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 TOP1MTQ969P6 601 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 CHIAQ9BZP6 476 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PRDM12Q9H4Q4 367 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 SPON1Q9HCB6 807 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 DNAJC11Q9NVH1 559 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 ABCG2Q9UNQ0 655 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PHF24Q9UPV7 400 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 MYO5BQ9ULV0 1848 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 OR2AT4A6NND4 320 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 KDM4BO94953 1096 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 GNALP38405 381 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 MAGEA12P43365 314 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 EIF5AP63241 154 aaKnown RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 KLF10Q13118 480 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 C17orf64Q86WR6 236 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 OR4C6Q8NH72 309 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PDE10AQ9Y233 779 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 FABP12A6NFH5 140 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 ALOX15BO15296 676 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 DHX15O43143 795 aaKnown RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 IFNA7P01567 189 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 IL1R1P14778 569 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 NCK1P16333 377 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PCBP1Q15365 356 aaKnown RBP eCLIP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 VPS26BQ4G0F5 336 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 LINGO2Q7L985 606 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 SLITRK4Q8IW52 837 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 HJURPQ8NCD3 748 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 FAM13CQ8NE31 585 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 CENPNQ96H22 339 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-202ENST00000396578 LGMNQ99538 433 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PTTG2Q9NZH5 202 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 CARD8Q9Y2G2 431 aa13.89□□□□□ -0.19
COL4A3-202ENST00000396578 PIRTP0C851 137 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 TGFB2P61812 414 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 SLC30A6Q6NXT4 461 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 ANKRD52Q8NB46 1076 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 TWIST2Q8WVJ9 160 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 FCGR1BQ92637 280 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 LRRC4CQ9HCJ2 640 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 NEUROD4Q9HD90 331 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 IL1RAPQ9NPH3 570 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 AGO1Q9UL18 857 aaKnown RBP13.88□□□□□ -0.19
COL4A3-202ENST00000396578 C2orf71A6NGG8 1288 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 EFCAB9A8MZ26 197 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 CTPS1P17812 591 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 SP100P23497 879 aaPredicted RBP13.88□□□□□ -0.19
COL4A3-202ENST00000396578 AZGP1P25311 298 aaKnown RBP13.88□□□□□ -0.19
COL4A3-202ENST00000396578 PRDX6P30041 224 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 MXD1Q05195 221 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 MPP2Q14168 576 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 SIM2Q14190 667 aaPredicted RBP13.88□□□□□ -0.19
COL4A3-202ENST00000396578 CAPN13Q6MZZ7 669 aaPredicted RBP13.88□□□□□ -0.19
COL4A3-202ENST00000396578 CHRDL2Q6WN34 429 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 LRRC69Q6ZNQ3 347 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 PIGXQ8TBF5 258 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 NKD1Q969G9 470 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 MAP4K5Q9Y4K4 846 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 LAMP2P13473 410 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 IST1P53990 364 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 FSTL1Q12841 308 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 BBS12Q6ZW61 710 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 USP30Q70CQ3 517 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 CLIP4Q8N3C7 705 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 OR10G6Q8NH81 332 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 SETD6Q8TBK2 473 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 ZNF570Q96NI8 536 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 RCOR3Q9P2K3 495 aaPredicted RBP13.88□□□□□ -0.19
COL4A3-202ENST00000396578 USP20Q9Y2K6 914 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 MYH13Q9UKX3 1938 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 A0A1W2PPM1 405 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 CYB5AP00167 134 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 CCR10P46092 362 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 PSEN2P49810 448 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 AIF1P55008 147 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 MAXP61244 160 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 TSPAN5P62079 268 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 FAM83AQ86UY5 434 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 CNPPD1Q9BV87 410 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 ADARB2Q9NS39 739 aaKnown RBP13.88□□□□□ -0.19
COL4A3-202ENST00000396578 MTRRQ9UBK8 725 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 CNTNAP4Q9C0A0 1308 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 PDCD5O14737 125 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 C22orf31O95567 290 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 IFNW1P05000 195 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 COL6A2P12110 1019 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 NPR2P20594 1047 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 ALDH4A1P30038 563 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 MATKP42679 507 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 OGFOD2Q6N063 350 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 TRAPPC12Q8WVT3 735 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 NMUR2Q9GZQ4 415 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 C11orf16Q9NQ32 467 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 ASAH2Q9NR71 780 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 HPF1Q9NWY4 346 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 ANKRD63C9JTQ0 380 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 DCLK1O15075 740 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 C4orf46Q504U0 113 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 ZDHHC20Q5W0Z9 365 aa13.88□□□□□ -0.19
COL4A3-202ENST00000396578 EME2A4GXA9 379 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms