RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TSPAN12O95859 305 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 THRAP10827 490 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 BPIP17213 487 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 SPAM1P38567 509 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 ECT2LQ008S8 904 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 ZRSR2Q15696 482 aaKnown RBP12.04□□□□□ -0.48
ITGB1-202ENST00000396033 EML3Q32P44 896 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 FAM219BQ5XKK7 198 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 ELMSAN1Q6PJG2 1045 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 USP45Q70EL2 814 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 NET1Q7Z628 596 aaPredicted RBP12.04□□□□□ -0.48
ITGB1-202ENST00000396033 PCDH20Q8N6Y1 951 aaKnown RBP12.04□□□□□ -0.48
ITGB1-202ENST00000396033 CCDC97Q96F63 343 aaPredicted RBP12.04□□□□□ -0.48
ITGB1-202ENST00000396033 ZSWIM3Q96MP5 696 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 ASB2Q96Q27 587 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 CEP44Q9C0F1 390 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 SUV39H2Q9H5I1 410 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 DCLRE1BQ9H816 532 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 MID1IP1Q9NPA3 183 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 CRLS1Q9UJA2 301 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 HCFC2Q9Y5Z7 792 aa12.04□□□□□ -0.48
ITGB1-202ENST00000396033 CEBPBP17676 345 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CARD16Q5EG05 197 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 DPY19L3Q6ZPD9 716 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 DNAJC5GQ8N7S2 189 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 ENDOVQ8N8Q3 282 aaKnown RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 ZNF557Q8N988 423 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 ACTRT2Q8TDY3 377 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 NAT14Q8WUY8 206 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 NSUN5Q96P11 429 aaKnown RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 BOCQ9BWV1 1114 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 SLCO3A1Q9UIG8 710 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 TSR3Q9UJK0 312 aaKnown RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 A0A088AWK7 358 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 RGSL1A5PLK6 1076 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 UGT2B4P06133 528 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CD1EP15812 388 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CLCN7P51798 805 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CYLC2Q14093 348 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 FBXO48Q5FWF7 155 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 C1orf146Q5VVC0 180 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 GRAMD4Q6IC98 578 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 Q6ZVU0 165 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 DEFB107AQ8IZN7 70 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 RBFAQ8N0V3 343 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 GRIN3AQ8TCU5 1115 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 TRPC4APQ8TEL6 797 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 UCMAQ8WVF2 138 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 ASIC4Q96FT7 647 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 ZBTB26Q9HCK0 441 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 GNPTGQ9UJJ9 305 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 SCN8AQ9UQD0 1980 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CHD7Q9P2D1 2997 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 C5orf67F2Z3F1 127 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 KRT36O76013 467 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CDK14O94921 469 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 ARSAP15289 507 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 ADSLP30566 484 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CA5AP35218 305 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 INHBCP55103 352 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 SH3BP2P78314 561 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CBX2Q14781 532 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CHRNA6Q15825 494 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 TRMT5Q32P41 509 aaKnown RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CRTC1Q6UUV9 634 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 RIPOR1Q6ZS17 1223 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 RBM23Q86U06 439 aaKnown RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 NAT16Q8N8M0 369 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 CFAP61Q8NHU2 1237 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 RP9Q8TA86 221 aaKnown RBP12.03□□□□□ -0.48
ITGB1-202ENST00000396033 ECHDC3Q96DC8 303 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 LYSMD1Q96S90 227 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 NOTCH4Q99466 2003 aa12.03□□□□□ -0.48
ITGB1-202ENST00000396033 PPP6CO00743 305 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 AIM2O14862 343 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 SNX2O60749 519 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 POP4O95707 220 aaKnown RBP12.02□□□□□ -0.48
ITGB1-202ENST00000396033 ITGB6P18564 788 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 UGT1A6P19224 532 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 UGT1A1P22309 533 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 UGT1A4P22310 534 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 ACRV1P26436 265 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 UGT1A3P35503 534 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 UGT1A5P35504 534 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 NUDT2P50583 147 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 RCN1Q15293 331 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 RNF220Q5VTB9 566 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 LRRC66Q68CR7 880 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 TPRG1Q6ZUI0 275 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 CLYBLQ8N0X4 340 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 MYLIPQ8WY64 445 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 VOPP1Q96AW1 172 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 C19orf43Q9BQ61 176 aa12.02□□□□□ -0.48
ITGB1-202ENST00000396033 LBHD1Q9BQE6 289 aaPredicted RBP12.02□□□□□ -0.48
ITGB1-202ENST00000396033 SOBPA7XYQ1 873 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 RPS3P23396 243 aaKnown RBP eCLIP12.02□□□□□ -0.494e-8■■□□□ 12.1
ITGB1-202ENST00000396033 PPP1R3AQ16821 1122 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 ANKS6Q68DC2 871 aa12.02□□□□□ -0.49
ITGB1-202ENST00000396033 CWF19L1Q69YN2 538 aaKnown RBP12.02□□□□□ -0.49
ITGB1-202ENST00000396033 ADIPOR2Q86V24 386 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms