RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 RPS9P46781 194 aaKnown RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 GLRBP48167 497 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 CAMK2GQ13555 558 aaPredicted RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 RCN2Q14257 317 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 TMEM207Q6UWW9 146 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 TMEM92Q6UXU6 159 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 SYT13Q7L8C5 426 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 PLPP6Q8IY26 295 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 CCDC126Q96EE4 140 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 HEPHQ9BQS7 1158 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 NMUR2Q9GZQ4 415 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 C2orf42Q9NWW7 574 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 IL17CQ9P0M4 197 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 MARCOQ9UEW3 520 aaPredicted RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 VPS13AQ96RL7 3174 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 CHURC1-FNTBB4DL54 471 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 NPHS1O60500 1241 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 CCDC22O60826 627 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 LEFTY1O75610 366 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 CTSLP07711 333 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 SERPINA6P08185 405 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 NQO1P15559 274 aaKnown RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 AOC1P19801 751 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 ATP5F1P24539 256 aaPredicted RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 SLC8A1P32418 973 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 MTAPQ13126 283 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 TBCCQ15814 346 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 POM121L1PQ3SYA9 428 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 ARSIQ5FYB1 569 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 ARMC12Q5T9G4 340 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 PIWIL4Q7Z3Z4 852 aaKnown RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 MMAAQ8IVH4 418 aaKnown RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 ANKRD49Q8WVL7 239 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 PBXIP1Q96AQ6 731 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 SMIM14Q96QK8 99 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 TUBGCP5Q96RT8 1024 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 LYSMD1Q96S90 227 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 MKRN2Q9H000 416 aaKnown RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 CDH19Q9H159 772 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 ATP13A3Q9H7F0 1226 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 EPB41L3Q9Y2J2 1087 aaPredicted RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 MED16Q9Y2X0 877 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 RAP2CQ9Y3L5 183 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 ZNF711Q9Y462 761 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 PCDHB9Q9Y5E1 797 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 TCRBV21S2A2A0A5A6 115 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 TNFRSF10AO00220 468 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 HGSO14964 777 aaPredicted RBP14.99□□□□□ -0.01
SCAF11-204ENST00000395454 UGT2B4P06133 528 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 ZNF37AP17032 561 aaPredicted RBP14.99□□□□□ -0.01
SCAF11-204ENST00000395454 RASSF2P50749 326 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 XIAPP98170 497 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 NFKB2Q00653 900 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 BCL2L1Q07817 233 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 PEX6Q13608 980 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 CSHL1Q14406 222 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 CDKN3Q16667 212 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 KLC3Q6P597 504 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 DSG4Q86SJ6 1040 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 ALYREFQ86V81 257 aaKnown RBP14.99□□□□□ -0.01
SCAF11-204ENST00000395454 CAMK1DQ8IU85 385 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 PAF1Q8N7H5 531 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 PNPLA1Q8N8W4 532 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 EID2BQ96D98 161 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 ECHDC3Q96DC8 303 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 SCYL1Q96KG9 808 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 FAM129BQ96TA1 746 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 COL25A1Q9BXS0 654 aaPredicted RBP14.99□□□□□ -0.01
SCAF11-204ENST00000395454 EPHX3Q9H6B9 360 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 WASF2Q9Y6W5 498 aa14.99□□□□□ -0.01
SCAF11-204ENST00000395454 A0A0J9YYE9 177 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 KPNA3O00505 521 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 MGRN1O60291 552 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 RNASEH1O60930 286 aaKnown RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 CBX6O95503 412 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 HSPA4LO95757 839 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 TRBC1P01850 177 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PRNPP04156 253 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 CCDC166P0CW27 439 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 SERPINA4P29622 427 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 TTPAP49638 278 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 DGKEP52429 567 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 COPAP53621 1224 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 KCNJ2P63252 427 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 SATB1Q01826 763 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 ZBTB16Q05516 673 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 CYB5D1Q6P9G0 228 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 TTC7BQ86TV6 843 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 ISCA2Q86U28 154 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 TMPRSS6Q8IU80 811 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 SPEM1Q8N4L4 309 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 ZNF781Q8N8C0 355 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 OR2T3Q8NH03 318 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PRR11Q96HE9 360 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 EBF4Q9BQW3 602 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 CPEB1Q9BZB8 566 aaKnown RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 SLC6A17Q9H1V8 727 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 POLMQ9NP87 494 aaPredicted RBP14.98□□□□□ -0.01
SCAF11-204ENST00000395454 PNPOQ9NVS9 261 aa14.98□□□□□ -0.01
SCAF11-204ENST00000395454 SARDHQ9UL12 918 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms