RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 C11orf96Q7Z7L8 435 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 ISCA2Q86U28 154 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 ADGRG2Q8IZP9 1017 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 SH3KBP1Q96B97 665 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 CNBD2Q96M20 576 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 PANX3Q96QZ0 392 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 VCX3BQ9H321 246 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 XYLBO75191 536 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 H2AFYO75367 372 aaKnown RBP15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 TM7SF2O76062 418 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 TIMP1P01033 207 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 CAPN1P07384 714 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 CA3P07451 260 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 RPL38P63173 70 aaKnown RBP15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 TRMT5Q32P41 509 aaKnown RBP15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 ZNF549Q6P9A3 640 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 ASRGL1Q7L266 308 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 NUDT8Q8WV74 236 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 AARSD1Q9BTE6 412 aaKnown RBP15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 MTIF3Q9H2K0 278 aaKnown RBP15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 ITM2BQ9Y287 266 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 BACE2Q9Y5Z0 518 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 RFXAPO00287 272 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 GNGT2O14610 69 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 LEPRP48357 1165 aaKnown RBP15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 ZXDBP98169 803 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 SULT2A1Q06520 285 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 TNK2Q07912 1038 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 KRT33BQ14525 404 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 CLYBLQ8N0X4 340 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 OR52B6Q8NGF0 335 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 KLF16Q9BXK1 252 aaPredicted RBP15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 VTI1BQ9UEU0 232 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 SAC3D1A6NKF1 404 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 DRGXA6NNA5 263 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 AGRPO00253 132 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 PTPN2P17706 415 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 XRCC1P18887 633 aaPredicted RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 MSH3P20585 1137 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 THOP1P52888 689 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 PGS1Q32NB8 556 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 TECRLQ5HYJ1 363 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 WASHC2DQ5SRD0 308 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 RARS2Q5T160 578 aaKnown RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 UGT3A1Q6NUS8 523 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 EPGNQ6UW88 154 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 BNIPLQ7Z465 357 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 RALGPS2Q86X27 583 aaPredicted RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 OR2AP1Q8NGE2 309 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 PPM1MQ96MI6 270 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 AKTIPQ9H8T0 292 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 IPPKQ9H8X2 491 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 OPTCQ9UBM4 332 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 VPS9D1Q9Y2B5 631 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 TDRKHQ9Y2W6 561 aaKnown RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 ZNF638Q14966 1978 aaKnown RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 A0A0J9YYE9 177 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 FAM149AA5PLN7 773 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 ZNF839A8K0R7 811 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 SLCO1B7G3V0H7 640 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 GSNP06396 782 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 PABPC1P11940 636 aaKnown RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 PCNAP12004 261 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 ANPEPP15144 967 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 GRIA3P42263 894 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 NRIP1P48552 1158 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 NEK2P51955 445 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 PSME3P61289 254 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 HSF5Q4G112 596 aaPredicted RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 SYTL1Q8IYJ3 562 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 GDPD5Q8WTR4 605 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 PTCD3Q96EY7 689 aaKnown RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 TNFRSF12AQ9NP84 129 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 OGDHLQ9ULD0 1010 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 TDRD15B5MCY1 1934 aaKnown RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 TTC34A8MYJ7 566 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 HLA-FP30511 346 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 HNF4AP41235 474 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 SH3BP2P78314 561 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 ZNF33AQ06730 810 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 GRB7Q14451 532 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 ATP6AP1LQ52LC2 224 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 FAM124AQ86V42 546 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 CHPFQ8IZ52 775 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 CNDP1Q96KN2 507 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 CCDC106Q9BWC9 280 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 EBF2Q9HAK2 575 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 PAK6Q9NQU5 681 aaPredicted RBP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 IGSF5Q9NSI5 407 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 POMPQ9Y244 141 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 NDUFAF1Q9Y375 327 aa15.75■□□□□ 0.11
SMARCD1-202ENST00000394963 CFAP99D6REC4 459 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 RAD51BO15315 384 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 PEX11BO96011 259 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 ITGAXP20702 1163 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 GCKP35557 465 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 POLE2P56282 527 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 TTLL9Q3SXZ7 439 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms