RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 SH2D4BQ5SQS7 431 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 ZNF678Q5SXM1 525 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 PARM1Q6UWI2 310 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 PHTF2Q8N3S3 785 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 RHEBL1Q8TAI7 183 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 FGF14Q92915 247 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 FUBP1Q96AE4 644 aaKnown RBP18.87■□□□□ 0.61
CLDND1-203ENST00000394181 CNDP1Q96KN2 507 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 CCDC106Q9BWC9 280 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 ARHGEF3Q9NR81 526 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 THG1LQ9NWX6 298 aaKnown RBP18.87■□□□□ 0.61
CLDND1-203ENST00000394181 ITM2BQ9Y287 266 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 FIS1Q9Y3D6 152 aa18.87■□□□□ 0.61
CLDND1-203ENST00000394181 NCF1BA6NI72 391 aaPredicted RBP18.86■□□□□ 0.61
CLDND1-203ENST00000394181 C16orf96A6NNT2 1141 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 AGAP14A8MT82 685 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 NCF1CA8MVU1 366 aaPredicted RBP18.86■□□□□ 0.61
CLDND1-203ENST00000394181 PRR5-ARHGAP8B1AHC4 643 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 NEMP1O14524 444 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 TRIM16O95361 564 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 SERPINA6P08185 405 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 NCF1P14598 390 aaPredicted RBP18.86■□□□□ 0.61
CLDND1-203ENST00000394181 OPRD1P41143 372 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 IL2P60568 153 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 ARHGAP8P85298 464 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 B4GALNT1Q00973 533 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 FCHO2Q0JRZ9 810 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 ASPHQ12797 758 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 FNDC3BQ53EP0 1204 aaKnown RBP18.86■□□□□ 0.61
CLDND1-203ENST00000394181 ZNF805Q5CZA5 627 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 Q6ZVL8 140 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 RBFAQ8N0V3 343 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 PPM1EQ8WY54 764 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 CCDC126Q96EE4 140 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 C19orf43Q9BQ61 176 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 HCN2Q9UL51 889 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 RNF112Q9ULX5 631 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 SLC8A2Q9UPR5 921 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 DHRS7Q9Y394 339 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 UPK3BL1B0FP48 263 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 UPK3BL2E5RIL1 263 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 F8W8V4 182 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 PLK4O00444 970 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 KERAO60938 352 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 SMIM24O75264 130 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 SUPT7LO94864 414 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 TPBGLP0DKB5 382 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 NQO1P15559 274 aaKnown RBP18.86■□□□□ 0.61
CLDND1-203ENST00000394181 CD9P21926 228 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 EPHA3P29320 983 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 ETV3P41162 512 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 CPA2P48052 419 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 HK3P52790 923 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 PDCD2Q16342 344 aaPredicted RBP18.86■□□□□ 0.61
CLDND1-203ENST00000394181 SPDYAQ5MJ70 313 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 C9orf64Q5T6V5 341 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 EP400NLQ6ZTU2 488 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 FRMD7Q6ZUT3 714 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 SLC22A9Q8IVM8 553 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 NKAPQ8N5F7 415 aaKnown RBP18.86■□□□□ 0.61
CLDND1-203ENST00000394181 STAG3L4Q8TBR4 150 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 PPP2R3CQ969Q6 453 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 UTP4Q969X6 686 aaKnown RBP18.86■□□□□ 0.61
CLDND1-203ENST00000394181 NSL1Q96IY1 281 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 NSUN5Q96P11 429 aaKnown RBP18.86■□□□□ 0.61
CLDND1-203ENST00000394181 S1PR5Q9H228 398 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 OBP2AQ9NY56 170 aa18.86■□□□□ 0.61
CLDND1-203ENST00000394181 SUPT3HB4E1H0 165 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 E9PBE3 544 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 HDAC3O15379 428 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 KLHL41O60662 606 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 SUPT3HO75486 399 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 SLC25A14O95258 325 aaPredicted RBP18.85■□□□□ 0.61
CLDND1-203ENST00000394181 ENO1P06733 434 aaKnown RBP18.85■□□□□ 0.61
CLDND1-203ENST00000394181 CD1EP15812 388 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 RPS3P23396 243 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLDND1-203ENST00000394181 VIPR1P32241 457 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 GJA4P35212 333 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 VASPP50552 380 aaPredicted RBP18.85■□□□□ 0.61
CLDND1-203ENST00000394181 HERVK_113P63132 956 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 ADAM15Q13444 863 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 RUNX3Q13761 415 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 GRIN2CQ14957 1233 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 KRT72Q14CN4 511 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 PDGFRLQ15198 375 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 GPR33Q49SQ1 333 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 SEL1L3Q68CR1 1132 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 L3HYPDHQ96EM0 354 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 ERVK-6Q9BXR3 956 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 PCDHB1Q9Y5F3 818 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 DOCK8Q8NF50 2099 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 CCDC189A1A4V9 331 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 TSPAN11A1L157 253 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 TBC1D3BA6NDS4 549 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 KPNA3O00505 521 aaPredicted RBP18.85■□□□□ 0.61
CLDND1-203ENST00000394181 CCDC22O60826 627 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 GFAPP14136 432 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 ATP6V0D1P61421 351 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 NFKB2Q00653 900 aa18.85■□□□□ 0.61
CLDND1-203ENST00000394181 RALGDSQ12967 914 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms