RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PPM1FP49593 454 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 SLC18A3Q16572 532 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 SNAP47Q5SQN1 464 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 SLC9A4Q6AI14 798 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 WASH2PQ6VEQ5 465 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 TIPARPQ7Z3E1 657 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 ESX1Q8N693 406 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 PLD5Q8N7P1 536 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 IMP4Q96G21 291 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 PLEKHG4BQ96PX9 1271 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 TRIM4Q9C037 500 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 BRD8Q9H0E9 1235 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 CBX8Q9HC52 389 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 WASH6PQ9NQA3 447 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 ANAPC2Q9UJX6 822 aa17.26■□□□□ 0.35
SNRPA1-202ENST00000394082 FLNCQ14315 2725 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 LOC101059948A0A1B0GTJ6 334 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 VEGFDO43915 354 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 SNX2O60749 519 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 MTA2O94776 668 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 STAT5AP42229 794 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 TLE1Q04724 770 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 CDC20Q12834 499 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 ZBTB17Q13105 803 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 IL11RAQ14626 422 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 PDK1Q15118 436 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 ABRAXAS1Q6UWZ7 409 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 TMEM26Q6ZUK4 368 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 ADGRG6Q86SQ4 1221 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 NT5DC3Q86UY8 548 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 RBM12BQ8IXT5 1001 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 DTX3LQ8TDB6 740 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 CPLX3Q8WVH0 158 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 APOBEC4Q8WW27 367 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 RAPGEF5Q92565 580 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 GLYATL1Q969I3 302 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 C9orf72Q96LT7 481 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 TIMM29Q9BSF4 260 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 SPATA16Q9BXB7 569 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 SLC25A51Q9H1U9 297 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 OR2AG1Q9H205 316 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 PRDM8Q9NQV8 689 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 KLC4Q9NSK0 619 aa17.25■□□□□ 0.35
SNRPA1-202ENST00000394082 KMOO15229 486 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 NKX2-8O15522 239 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 ZFXP17010 805 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 GJC1P36383 396 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 CASRP41180 1078 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 NOP2P46087 812 aaKnown RBP17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 ASTE1Q2TB18 679 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 AGAP9Q5VTM2 703 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 LUZP1Q86V48 1076 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 CPNE8Q86YQ8 564 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 GPR26Q8NDV2 337 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 OLFM3Q96PB7 478 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 VPS35Q96QK1 796 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 CTRCQ99895 268 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 TBC1D10AQ9BXI6 508 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 RAB33BQ9H082 229 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 APMAPQ9HDC9 416 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 POT1Q9NUX5 634 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.24■□□□□ 0.355e-8■□□□□ 11.1
SNRPA1-202ENST00000394082 PTPN13Q12923 2485 aa17.24■□□□□ 0.35
SNRPA1-202ENST00000394082 SSU72P8A0A1W2PR75 194 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 GOLGA6L3A6NEY3 463 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 C3orf70A6NLC5 250 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 PPP1R12AO14974 1030 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 KCNJ13O60928 360 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 UBXN7O94888 489 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 RECKO95980 971 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 VIPP01282 170 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 TMEM253P0C7T8 217 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 ZNF7P17097 686 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 SLC19A1P41440 591 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 ARHGAP25P42331 645 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 CDK18Q07002 472 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 GALNT3Q14435 633 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 LRRC38Q5VT99 294 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 KDELC2Q7Z4H8 507 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 LRRTM4Q86VH4 590 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 C9orf43Q8TAL5 461 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 LRRN4Q8WUT4 740 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 STARD8Q92502 1023 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 ZNF768Q9H5H4 540 aaKnown RBP17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 ZNF624Q9P2J8 865 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 EPHA6Q9UF33 1036 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 ZNF711Q9Y462 761 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 KCTD3Q9Y597 815 aa17.23■□□□□ 0.35
SNRPA1-202ENST00000394082 LRRD1A4D1F6 860 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 CASP14P31944 242 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 MAPK9P45984 424 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 INSCQ1MX18 579 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 ZFYVE27Q5T4F4 411 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 CYB5D1Q6P9G0 228 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 PRSS42Q7Z5A4 293 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 GPR63Q9BZJ6 419 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 OSGEPL1Q9H4B0 414 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 SLC40A1Q9NP59 571 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms