RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 CHUKO15111 745 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 HDAC3O15379 428 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 KLHL41O60662 606 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 ASLP04424 464 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 JUNP05412 331 aaKnown RBP17.5■□□□□ 0.39
SHTN1-203ENST00000392901 SRPRAP08240 638 aaKnown RBP17.5■□□□□ 0.39
SHTN1-203ENST00000392901 TSPAN8P19075 237 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 AOC1P19801 751 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 IMPDH1P20839 514 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 IL2P60568 153 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 HYAL1Q12794 435 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 PFKFB4Q16877 469 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 SH2D4BQ5SQS7 431 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 BRAT1Q6PJG6 821 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 RBFAQ8N0V3 343 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 KIAA1958Q8N8K9 716 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 STAG3L4Q8TBR4 150 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 AGAP11Q8TF27 550 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 KIAA1191Q96A73 305 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 ATOH8Q96SQ7 321 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 C19orf43Q9BQ61 176 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 NUF2Q9BZD4 464 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 ZFP14Q9HCL3 533 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 THG1LQ9NWX6 298 aaKnown RBP17.5■□□□□ 0.39
SHTN1-203ENST00000392901 CD84Q9UIB8 345 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 SORCS3Q9UPU3 1222 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 PCDHB1Q9Y5F3 818 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 COMMD10Q9Y6G5 202 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 PRSS21Q9Y6M0 314 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 NPEPPSL1A6NEC2 478 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 BTN3A1O00481 513 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 NEMP1O14524 444 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 C1SP09871 688 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 MTHFD2P13995 350 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 GFAPP14136 432 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 FCARP24071 287 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 ATP6V0D1P61421 351 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 ARHGEF7Q14155 803 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 GAB4Q2WGN9 574 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 PHTF2Q8N3S3 785 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 POU5F2Q8N7G0 328 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 PTGR2Q8N8N7 351 aaPredicted RBP17.5■□□□□ 0.39
SHTN1-203ENST00000392901 RBM15BQ8NDT2 890 aaKnown RBP17.5■□□□□ 0.39
SHTN1-203ENST00000392901 LINGO1Q96FE5 620 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 HPS4Q9NQG7 708 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHTN1-203ENST00000392901 UNC80Q8N2C7 3258 aa17.5■□□□□ 0.39
SHTN1-203ENST00000392901 TRBV5-4A0A0C4DH59 114 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 SIX3O95343 332 aaPredicted RBP17.49■□□□□ 0.39
SHTN1-203ENST00000392901 CLCN7P51798 805 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 TBCCQ15814 346 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 PDCD2Q16342 344 aaPredicted RBP17.49■□□□□ 0.39
SHTN1-203ENST00000392901 GPR33Q49SQ1 333 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 ZNF678Q5SXM1 525 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 NAIF1Q69YI7 327 aaPredicted RBP17.49■□□□□ 0.39
SHTN1-203ENST00000392901 UGT3A1Q6NUS8 523 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 SFTPA1Q8IWL2 248 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 MAGEC3Q8TD91 643 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 GDF15Q99988 308 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 NCF1BA6NI72 391 aaPredicted RBP17.49■□□□□ 0.39
SHTN1-203ENST00000392901 NCF1CA8MVU1 366 aaPredicted RBP17.49■□□□□ 0.39
SHTN1-203ENST00000392901 SUPT3HB4E1H0 165 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 SPECC1L-ADORA2AF8WAN1 911 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 KERAO60938 352 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 SUPT3HO75486 399 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 TRIM16O95361 564 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 TSPAN12O95859 305 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 HLA-EP13747 358 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 NCF1P14598 390 aaPredicted RBP17.49■□□□□ 0.39
SHTN1-203ENST00000392901 GM2AP17900 193 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 CD9P21926 228 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 EPHA3P29320 983 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 SERPINB5P36952 375 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 CDH13P55290 713 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 GRM2Q14416 872 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 ATP13A5Q4VNC0 1218 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 FBXO48Q5FWF7 155 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 ANKRD54Q6NXT1 300 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 VITQ6UXI7 678 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 NXPE1Q8N323 547 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 KDM1BQ8NB78 822 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 GSTO2Q9H4Y5 243 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 DENND2DQ9H6A0 471 aaPredicted RBP17.49■□□□□ 0.39
SHTN1-203ENST00000392901 TCF7L2Q9NQB0 619 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 GNPTGQ9UJJ9 305 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 CDH7Q9ULB5 785 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 L3MBTL1Q9Y468 752 aa17.49■□□□□ 0.39
SHTN1-203ENST00000392901 SCN8AQ9UQD0 1980 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 LRRC14BA6NHZ5 514 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 DCXO43602 365 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 TIMP2P16035 220 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 XPAP23025 273 aaPredicted RBP17.48■□□□□ 0.39
SHTN1-203ENST00000392901 SPINT3P49223 89 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 HERVK_113P63132 956 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 NFKB2Q00653 900 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 FNDC3BQ53EP0 1204 aaKnown RBP17.48■□□□□ 0.39
SHTN1-203ENST00000392901 LYPLAL1Q5VWZ2 237 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 FAM219BQ5XKK7 198 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 FRMD7Q6ZUT3 714 aa17.48■□□□□ 0.39
SHTN1-203ENST00000392901 CUZD1Q86UP6 607 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms