RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 TSPAN6O43657 245 aa26.56■■□□□ 1.84
MSX1-201ENST00000382723 AP1G1O43747 822 aa26.56■■□□□ 1.84
MSX1-201ENST00000382723 RPS3P23396 243 aaKnown RBP eCLIP26.56■■□□□ 1.84
MSX1-201ENST00000382723 ITIH4Q14624 930 aa26.56■■□□□ 1.84
MSX1-201ENST00000382723 PDK4Q16654 411 aa26.56■■□□□ 1.84
MSX1-201ENST00000382723 HSF5Q4G112 596 aaPredicted RBP26.56■■□□□ 1.84
MSX1-201ENST00000382723 CYP2U1Q7Z449 544 aa26.56■■□□□ 1.84
MSX1-201ENST00000382723 SIDT2Q8NBJ9 832 aaKnown RBP26.56■■□□□ 1.84
MSX1-201ENST00000382723 FAM107BQ9H098 131 aa26.56■■□□□ 1.84
MSX1-201ENST00000382723 CPSF2Q9P2I0 782 aaKnown RBP26.56■■□□□ 1.84
MSX1-201ENST00000382723 GMNCA6NCL1 334 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 IGLON5A6NGN9 336 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 MTX2O75431 263 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 WISP3O95389 354 aaPredicted RBP26.55■■□□□ 1.84
MSX1-201ENST00000382723 PYGLP06737 847 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 ITGB6P18564 788 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 AKT1P31749 480 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 NSG1P42857 185 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 B4GALNT1Q00973 533 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 PAQR3Q6TCH7 311 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 PELI3Q8N2H9 469 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 DTX3LQ8TDB6 740 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 KCNJ9Q92806 393 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 GPR78Q96P69 363 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 SLC30A3Q99726 388 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 EPN3Q9H201 632 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 POPDC3Q9HBV1 291 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 SMOXQ9NWM0 555 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 TCRBV21S2A2A0A5A6 115 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 PRR23AA6NEV1 266 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 VIMP08670 466 aaKnown RBP26.55■■□□□ 1.84
MSX1-201ENST00000382723 LTA4HP09960 611 aaKnown RBP26.55■■□□□ 1.84
MSX1-201ENST00000382723 CHRNB1P11230 501 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 PRKCQQ04759 706 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 FAM83EQ2M2I3 478 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 LRRC8EQ6NSJ5 796 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 KIAA1324Q6UXG2 1013 aaKnown RBP26.55■■□□□ 1.84
MSX1-201ENST00000382723 DET1Q7L5Y6 550 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 LCA5Q86VQ0 697 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 OR14C36Q8NHC7 312 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 MRGPRX1Q96LB2 322 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 UBXN10Q96LJ8 280 aa26.55■■□□□ 1.84
MSX1-201ENST00000382723 TRMT6Q9UJA5 497 aaKnown RBP26.55■■□□□ 1.84
MSX1-201ENST00000382723 OAS3Q9Y6K5 1087 aaKnown RBP26.55■■□□□ 1.84
MSX1-201ENST00000382723 KRBA1A5PL33 1030 aa26.54■■□□□ 1.84
MSX1-201ENST00000382723 INPP4BO15327 924 aa26.54■■□□□ 1.84
MSX1-201ENST00000382723 ZNF37AP17032 561 aaPredicted RBP26.54■■□□□ 1.84
MSX1-201ENST00000382723 TARSP26639 723 aaKnown RBP26.54■■□□□ 1.84
MSX1-201ENST00000382723 TSNAXIP1Q2TAA8 658 aa26.54■■□□□ 1.84
MSX1-201ENST00000382723 ZNF648Q5T619 568 aaPredicted RBP26.54■■□□□ 1.84
MSX1-201ENST00000382723 AGAP9Q5VTM2 703 aa26.54■■□□□ 1.84
MSX1-201ENST00000382723 CCDC91Q7Z6B0 441 aa26.54■■□□□ 1.84
MSX1-201ENST00000382723 RAVER1Q8IY67 606 aaKnown RBP26.54■■□□□ 1.84
MSX1-201ENST00000382723 FSTL5Q8N475 847 aaPredicted RBP26.54■■□□□ 1.84
MSX1-201ENST00000382723 LRRC8CQ8TDW0 803 aa26.54■■□□□ 1.84
MSX1-201ENST00000382723 CHMP6Q96FZ7 201 aa26.54■■□□□ 1.84
MSX1-201ENST00000382723 K7ESM1 405 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 TK2O00142 265 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 TRIM16O95361 564 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 ACADMP11310 421 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 NDUFV2P19404 249 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 TAC1P20366 129 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 BGNP21810 368 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 UBXN2BQ14CS0 331 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 CRY1Q16526 586 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 TTC31Q49AM3 519 aaPredicted RBP26.53■■□□□ 1.84
MSX1-201ENST00000382723 SEL1L3Q68CR1 1132 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 RAET1GQ6H3X3 334 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 FAM124AQ86V42 546 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 NUDCD3Q8IVD9 361 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 BTN2A2Q8WVV5 523 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 ZNF75CPQ92670 426 aaPredicted RBP26.53■■□□□ 1.84
MSX1-201ENST00000382723 DCUN1D1Q96GG9 259 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 ZNF317Q96PQ6 595 aaPredicted RBP26.53■■□□□ 1.84
MSX1-201ENST00000382723 LMAN1LQ9HAT1 526 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 THEGQ9P2T0 379 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 IGLV3-16A0A075B6K0 115 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 TM7SF2O76062 418 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 BPGMP07738 259 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 KCNA4P22459 653 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 CREB5Q02930 508 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 ZNF765Q7L2R6 523 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 LRRC34Q8IZ02 419 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 GIMAP7Q8NHV1 300 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 LKAAEAR1Q8TD35 194 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 CD200R1Q8TD46 325 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 GLYATL1Q969I3 302 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 SYTL2Q9HCH5 934 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 XPR1Q9UBH6 696 aa26.53■■□□□ 1.84
MSX1-201ENST00000382723 GPR1P46091 355 aa26.52■■□□□ 1.84
MSX1-201ENST00000382723 KHDC1Q4VXA5 237 aaKnown RBP26.52■■□□□ 1.84
MSX1-201ENST00000382723 KLC3Q6P597 504 aa26.52■■□□□ 1.84
MSX1-201ENST00000382723 MACC1Q6ZN28 852 aa26.52■■□□□ 1.84
MSX1-201ENST00000382723 ZNF687Q8N1G0 1237 aa26.52■■□□□ 1.84
MSX1-201ENST00000382723 OSBPL6Q9BZF3 934 aa26.52■■□□□ 1.84
MSX1-201ENST00000382723 MANSC1Q9H8J5 431 aa26.52■■□□□ 1.84
MSX1-201ENST00000382723 COPG2Q9UBF2 871 aa26.52■■□□□ 1.84
MSX1-201ENST00000382723 WNT16Q9UBV4 365 aa26.52■■□□□ 1.84
MSX1-201ENST00000382723 SCML1Q9UN30 329 aa26.52■■□□□ 1.84
MSX1-201ENST00000382723 PLXNA2O75051 1894 aa26.51■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms