RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 PCYT1BQ9Y5K3 369 aaPredicted RBP16.63■□□□□ 0.25
HMGN4-201ENST00000377575 A0A1W2PNU3 283 aaPredicted RBP16.62■□□□□ 0.25
HMGN4-201ENST00000377575 PLD2O14939 933 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 CHUKO15111 745 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 KMOO15229 486 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 NRDCO43847 1150 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 AGTP01019 485 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 ITGA2BP08514 1039 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 OR1D5P58170 312 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 ITGA9Q13797 1035 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 INSCQ1MX18 579 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 AMZ1Q400G9 498 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 ATP13A5Q4VNC0 1218 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 ZNF648Q5T619 568 aaPredicted RBP16.62■□□□□ 0.25
HMGN4-201ENST00000377575 CRTC3Q6UUV7 619 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 RAB11FIP2Q7L804 512 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 PIM3Q86V86 326 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 LRRTM4Q86VH4 590 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 SFRP1Q8N474 314 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 AVL9Q8NBF6 648 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 GDAP1Q8TB36 358 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 SLC37A2Q8TED4 501 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 TMEM159Q96B96 161 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 SLC46A1Q96NT5 459 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 ALS2CR12Q96Q35 445 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 ZMYND15Q9H091 742 aa16.62■□□□□ 0.25
HMGN4-201ENST00000377575 KIR2DS5A0A0G2JLQ3 304 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 A0A0G2JNG1 304 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 GLYATL1P3A0A0U1RQE8 302 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 C5orf60A6NFR6 353 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 OR5K4A6NMS3 321 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 C2orf81A6NN90 581 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 KIR2DS3K7RE56 304 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 PPM1DO15297 605 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 STX7O15400 261 aaKnown RBP16.61■□□□□ 0.25
HMGN4-201ENST00000377575 CCDC175P0C221 793 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 F3P13726 295 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 ADRA1AP35348 466 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 CLCNKAP51800 687 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 GPLD1P80108 840 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 PDE1BQ01064 536 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 ZFP36L1Q07352 338 aaKnown RBP16.61■□□□□ 0.25
HMGN4-201ENST00000377575 CCDC173Q0VFZ6 552 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 KIR2DS5Q14953 304 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 TAF1AQ15573 450 aaPredicted RBP16.61■□□□□ 0.25
HMGN4-201ENST00000377575 P3H1Q32P28 736 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 PHF19Q5T6S3 580 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 FAM151BQ6UXP7 276 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 RANBP10Q6VN20 620 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 SLC9B2Q86UD5 537 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 FBXO39Q8N4B4 442 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 BRSK1Q8TDC3 778 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 PRR11Q96HE9 360 aaPredicted RBP16.61■□□□□ 0.25
HMGN4-201ENST00000377575 TTC25Q96NG3 672 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 SLC38A3Q99624 504 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 DPYSL5Q9BPU6 564 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 TBL1YQ9BQ87 522 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 TIMM29Q9BSF4 260 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 OSGEPL1Q9H4B0 414 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 SARS2Q9NP81 518 aaKnown RBP16.61■□□□□ 0.25
HMGN4-201ENST00000377575 IL26Q9NPH9 171 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 KLC4Q9NSK0 619 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 KCNK4Q9NYG8 393 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 AKAP7Q9P0M2 348 aaPredicted RBP16.61■□□□□ 0.25
HMGN4-201ENST00000377575 TBC1D29Q9UFV1 150 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 FEZ2Q9UHY8 353 aaPredicted RBP16.61■□□□□ 0.25
HMGN4-201ENST00000377575 NBEAQ8NFP9 2946 aa16.61■□□□□ 0.25
HMGN4-201ENST00000377575 CDRT15L2A8MXV6 281 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 B4GAT1O43505 415 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 SNX2O60749 519 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 MTX2O75431 263 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 CDK14O94921 469 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 TNFSF15O95150 251 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 JMJD7P0C870 316 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 VCLP18206 1134 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 LPOP22079 712 aaPredicted RBP16.6■□□□□ 0.25
HMGN4-201ENST00000377575 HHEXQ03014 270 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 CHRNA6Q15825 494 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 PLA2G4EQ3MJ16 856 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 LDLRAP1Q5SW96 308 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 CLEC14AQ86T13 490 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 TRAPPC5Q8IUR0 188 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 SLITRK4Q8IW52 837 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 FAM71DQ8N9W8 422 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 KCNE4Q8WWG9 221 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 SH3KBP1Q96B97 665 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 CCDC97Q96F63 343 aaPredicted RBP16.6■□□□□ 0.25
HMGN4-201ENST00000377575 AHCYL2Q96HN2 611 aaKnown RBP16.6■□□□□ 0.25
HMGN4-201ENST00000377575 CMKLR1Q99788 373 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 APOL2Q9BQE5 337 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 FRMD8P1Q9BZ68 369 aaPredicted RBP16.6■□□□□ 0.25
HMGN4-201ENST00000377575 RDH14Q9HBH5 336 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 LOXL2Q9Y4K0 774 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 ARL5AQ9Y689 179 aa16.6■□□□□ 0.25
HMGN4-201ENST00000377575 ZFYVE26Q68DK2 2539 aa16.59■□□□□ 0.25
HMGN4-201ENST00000377575 IGHV1OR21-1A0A087WYE8 117 aa16.59■□□□□ 0.25
HMGN4-201ENST00000377575 PMS2P1A4D2B8 440 aa16.59■□□□□ 0.25
HMGN4-201ENST00000377575 A6NCN8 305 aa16.59■□□□□ 0.25
HMGN4-201ENST00000377575 BUD23O43709 281 aaKnown RBP16.59■□□□□ 0.25
HMGN4-201ENST00000377575 DUX1O43812 170 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms