RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ADAM12O43184 909 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 HSPA1AP0DMV8 641 aaKnown RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 HSPA1BP0DMV9 641 aaKnown RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 CYBAP13498 195 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 LPOP22079 712 aaPredicted RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 SLC6A2P23975 617 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 CORO1AP31146 461 aaKnown RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 HSPA7P48741 367 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 HTR6P50406 440 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 SGSHP51688 502 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 RHOAP61586 193 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 MGAT3Q09327 533 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 RGMBQ6NW40 437 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 GPRIN3Q6ZVF9 776 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 CMTR2Q8IYT2 770 aaKnown RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 SMOXQ9NWM0 555 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 TMEM181Q9P2C4 612 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 POLR3HQ9Y535 204 aaPredicted RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 MAGED1Q9Y5V3 778 aaPredicted RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 NUP214P35658 2090 aaPredicted RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 TRIM24O15164 1050 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 PFDN6O15212 129 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 TRMUO75648 421 aaKnown RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 BMP1P13497 986 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 UGT1A1P22309 533 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 UGT1A4P22310 534 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 UGT1A3P35503 534 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 UGT1A5P35504 534 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 IMPG1Q17R60 797 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 GPR107Q5VW38 600 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 GPR141Q7Z602 305 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 CAMK1DQ8IU85 385 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 ULK4Q96C45 1275 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 U3KQV3 271 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 MKI67P46013 3256 aaKnown RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 SYCE1LA8MT33 242 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 INSIG1O15503 277 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 ACSL4O60488 711 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 C1RP00736 705 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 POLR2JP52435 117 aaKnown RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 LRRC73Q5JTD7 316 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 ARMC12Q5T9G4 340 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 RNF180Q86T96 592 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 GFM2Q969S9 779 aaKnown RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 FEM1CQ96JP0 617 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 ADI1Q9BV57 179 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 CCDC90BQ9GZT6 254 aa12.82□□□□□ -0.36
USP11-204ENST00000377107 RSL24D1Q9UHA3 163 aaKnown RBP12.82□□□□□ -0.36
USP11-204ENST00000377107 LOC285095A0A1B0GVY8 99 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 IDO1P14902 403 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
USP11-204ENST00000377107 RPL38P63173 70 aaKnown RBP12.81□□□□□ -0.36
USP11-204ENST00000377107 HMGCS1Q01581 520 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 TSTA3Q13630 321 aaPredicted RBP12.81□□□□□ -0.36
USP11-204ENST00000377107 COLGALT2Q8IYK4 626 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 PARP8Q8N3A8 854 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 OR56A4Q8NGH8 313 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 ATOH8Q96SQ7 321 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 CLK4Q9HAZ1 481 aaKnown RBP12.81□□□□□ -0.36
USP11-204ENST00000377107 PNPLA3Q9NST1 481 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 KLQ9UEF7 1012 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 DNMT3LQ9UJW3 386 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 DMTF1Q9Y222 760 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 FADS3Q9Y5Q0 445 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 K7ERQ8 282 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 PAPSS2O95340 614 aaPredicted RBP12.81□□□□□ -0.36
USP11-204ENST00000377107 GSNP06396 782 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 HTR7P34969 479 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 IST1P53990 364 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 LAPTM5Q13571 262 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 ARHGEF7Q14155 803 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 UGT3A2Q3SY77 523 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 FUT10Q6P4F1 479 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 AFTPHQ6ULP2 937 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 FUBP1Q96AE4 644 aaKnown RBP12.81□□□□□ -0.36
USP11-204ENST00000377107 CCDC97Q96F63 343 aaPredicted RBP12.81□□□□□ -0.36
USP11-204ENST00000377107 POLR1BQ9H9Y6 1135 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 STARD7Q9NQZ5 370 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 IRAK4Q9NWZ3 460 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 WARS2Q9UGM6 360 aaKnown RBP12.81□□□□□ -0.36
USP11-204ENST00000377107 CIDEBQ9UHD4 219 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 ANAPC2Q9UJX6 822 aa12.81□□□□□ -0.36
USP11-204ENST00000377107 B4GAT1O43505 415 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 KERAO60938 352 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 E2F6O75461 281 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 LDLRP01130 860 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 SLC5A2P31639 672 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 SLC11A1P49279 550 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 RPS6KA3P51812 740 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 CCL23P55773 120 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 DSC3Q14574 896 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 TPGS1Q6ZTW0 290 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 ERMP1Q7Z2K6 904 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 DHRSXQ8N5I4 330 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 EZH1Q92800 747 aaPredicted RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 C8orf48Q96LL4 319 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 NSMCE2Q96MF7 247 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 OLA1Q9NTK5 396 aaKnown RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 WWOXQ9NZC7 414 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 OAZ2O95190 189 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms