RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CLDN19Q8N6F1 224 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 KDM1BQ8NB78 822 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 MAPK15Q8TD08 544 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 HCAR2Q8TDS4 363 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 NAT14Q8WUY8 206 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 PPM1EQ8WY54 764 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 LINGO1Q96FE5 620 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 ARL8BQ9NVJ2 186 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 PKD2L2Q9NZM6 624 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 CLEC1BQ9P126 229 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 RNF112Q9ULX5 631 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 PRSS21Q9Y6M0 314 aa17.52■□□□□ 0.39
CTTN-203ENST00000376561 CDC7O00311 574 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 HDAC3O15379 428 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 HNRNPLP14866 589 aaKnown RBP eCLIP17.51■□□□□ 0.39
CTTN-203ENST00000376561 OPRD1P41143 372 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 KRT72Q14CN4 511 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 POM121L1PQ3SYA9 428 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 ZNF678Q5SXM1 525 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 CES5AQ6NT32 575 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 FRMD7Q6ZUT3 714 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 YAF2Q8IY57 180 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 TDHQ8IZJ6 230 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 S1PR5Q9H228 398 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 SZT2Q5T011 3432 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 CFAP73A6NFT4 308 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 C16orf96A6NNT2 1141 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 SLCO1B7G3V0H7 640 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 BTN3A1O00481 513 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 HLA-EP13747 358 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 GJA4P35212 333 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 HERVK_113P63132 956 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 HNRNPA1L2Q32P51 320 aaKnown RBP17.51■□□□□ 0.39
CTTN-203ENST00000376561 SEL1L3Q68CR1 1132 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 RPS27LQ71UM5 84 aaKnown RBP17.51■□□□□ 0.39
CTTN-203ENST00000376561 PTGR2Q8N8N7 351 aaPredicted RBP17.51■□□□□ 0.39
CTTN-203ENST00000376561 FUBP1Q96AE4 644 aaKnown RBP17.51■□□□□ 0.39
CTTN-203ENST00000376561 KXD1Q9BQD3 176 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 TUBB6Q9BUF5 446 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 ERVK-6Q9BXR3 956 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 GSTO2Q9H4Y5 243 aa17.51■□□□□ 0.39
CTTN-203ENST00000376561 TCF20Q9UGU0 1960 aaKnown RBP17.51■□□□□ 0.39
CTTN-203ENST00000376561 NPEPPSL1A6NEC2 478 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 GRID2O43424 1007 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 PSMC3P17980 439 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 XPAP23025 273 aaPredicted RBP17.5■□□□□ 0.39
CTTN-203ENST00000376561 GALNT1Q10472 559 aaPredicted RBP17.5■□□□□ 0.39
CTTN-203ENST00000376561 ZNF234Q14588 700 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 PFKFB4Q16877 469 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 SLC9B1Q4ZJI4 515 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 MACC1Q6ZN28 852 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 HSD11B1LQ7Z5J1 315 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 KIF2BQ8N4N8 673 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 SLC7A6OSQ96CW6 309 aaPredicted RBP17.5■□□□□ 0.39
CTTN-203ENST00000376561 EML4Q9HC35 981 aaKnown RBP17.5■□□□□ 0.39
CTTN-203ENST00000376561 ARHGEF3Q9NR81 526 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 ZDHHC3Q9NYG2 299 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 VTI1BQ9UEU0 232 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 CD84Q9UIB8 345 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 SARDHQ9UL12 918 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 PIKFYVEQ9Y2I7 2098 aa17.5■□□□□ 0.39
CTTN-203ENST00000376561 EDDM13A0A1B0GTR0 161 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 TBC1D3BA6NDS4 549 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 CAPN14A8MX76 684 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 KPNA3O00505 521 aaPredicted RBP17.49■□□□□ 0.39
CTTN-203ENST00000376561 ECI2O75521 394 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 SUPT7LO94864 414 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 PRNPP04156 253 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 LAMP2P13473 410 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 GFAPP14136 432 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 NSG1P42857 185 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 KCNJ2P63252 427 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 DLX2Q07687 328 aaPredicted RBP17.49■□□□□ 0.39
CTTN-203ENST00000376561 UNC50Q53HI1 259 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 SH2D4BQ5SQS7 431 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 C9orf64Q5T6V5 341 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 PARS2Q7L3T8 475 aaKnown RBP17.49■□□□□ 0.39
CTTN-203ENST00000376561 LKAAEAR1Q8TD35 194 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 FGF14Q92915 247 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 ELSPBP1Q96BH3 223 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 PTCD3Q96EY7 689 aaKnown RBP17.49■□□□□ 0.39
CTTN-203ENST00000376561 TRMOQ9BU70 441 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 CCDC106Q9BWC9 280 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 SORCS3Q9UPU3 1222 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 CCDC189A1A4V9 331 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 SYCE1LA8MT33 242 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 SUPT3HB4E1H0 165 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 SUPT3HO75486 399 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 SLC25A14O95258 325 aaPredicted RBP17.49■□□□□ 0.39
CTTN-203ENST00000376561 ITGB6P18564 788 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 RASSF2P50749 326 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 RALGDSQ12967 914 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 PARM1Q6UWI2 310 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 DPPA4Q7L190 304 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 RAB44Q7Z6P3 723 aaPredicted RBP17.49■□□□□ 0.39
CTTN-203ENST00000376561 TREML1Q86YW5 311 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 INPP5DQ92835 1189 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 ULK4Q96C45 1275 aa17.49■□□□□ 0.39
CTTN-203ENST00000376561 PDLIM5Q96HC4 596 aaKnown RBP17.49■□□□□ 0.39
CTTN-203ENST00000376561 NSL1Q96IY1 281 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms