RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 GRID2O43424 1007 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 ECI2O75521 394 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 SLC25A14O95258 325 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 ENO1P06733 434 aaKnown RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 GFAPP14136 432 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 AGTR2P50052 363 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 ARHGAP8P85298 464 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 RUNX3Q13761 415 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 ARHGEF7Q14155 803 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 C18orf21Q32NC0 220 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 ATAT1Q5SQI0 421 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 YAF2Q8IY57 180 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 CNPY4Q8N129 248 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 NXPE1Q8N323 547 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 GBP7Q8N8V2 638 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 FBXO27Q8NI29 283 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 PPP2R3CQ969Q6 453 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 SPATA16Q9BXB7 569 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 THG1LQ9NWX6 298 aaKnown RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 SLC8A2Q9UPR5 921 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 STK38LQ9Y2H1 464 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 PPIL1Q9Y3C6 166 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 RAP2CQ9Y3L5 183 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 F5P12259 2224 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 A0A1B0GTL3 188 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 ESR1P03372 595 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 NCF2P19878 526 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-206ENST00000376496 XPAP23025 273 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-206ENST00000376496 SPINT3P49223 89 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 RPL14P50914 215 aaKnown RBP12.47□□□□□ -0.41
CLCN6-206ENST00000376496 B4GALNT1Q00973 533 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 UNC50Q53HI1 259 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 CLEC6AQ6EIG7 209 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 SERPINA13PQ6UXR4 307 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 TERB1Q8NA31 727 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 GSTO2Q9H4Y5 243 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 SYTL2Q9HCH5 934 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 ASB1Q9Y576 335 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 TRIOBPQ9H2D6 2365 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 CCDC189A1A4V9 331 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 UPK3BL1B0FP48 263 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 UPK3BL2E5RIL1 263 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 PFDN6O15212 129 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 PYGLP06737 847 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 ZNF7P17097 686 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-206ENST00000376496 HK3P52790 923 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 ADAM15Q13444 863 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 ZNF805Q5CZA5 627 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 C9orf64Q5T6V5 341 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 TMEM198Q66K66 360 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 RBFAQ8N0V3 343 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 FUBP1Q96AE4 644 aaKnown RBP12.47□□□□□ -0.41
CLCN6-206ENST00000376496 SLC7A6OSQ96CW6 309 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-206ENST00000376496 SLC40A1Q9NP59 571 aa12.47□□□□□ -0.41
CLCN6-206ENST00000376496 PLXNB3Q9ULL4 1909 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 TRBV5-4A0A0C4DH59 114 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 A8MUI8 341 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 SRPRAP08240 638 aaKnown RBP12.46□□□□□ -0.41
CLCN6-206ENST00000376496 KRT16P08779 473 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 LAMP2P13473 410 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 IL12RB1P42701 662 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 MAGEA9P43362 315 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 IL2P60568 153 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 POLR2LP62875 67 aaKnown RBP12.46□□□□□ -0.41
CLCN6-206ENST00000376496 RALGDSQ12967 914 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 KHDC1Q4VXA5 237 aaKnown RBP12.46□□□□□ -0.41
CLCN6-206ENST00000376496 ZNF678Q5SXM1 525 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 EGFLAMQ63HQ2 1017 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 BRAT1Q6PJG6 821 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 EPGNQ6UW88 154 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 MMAAQ8IVH4 418 aaKnown RBP12.46□□□□□ -0.41
CLCN6-206ENST00000376496 TDHQ8IZJ6 230 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 PELI3Q8N2H9 469 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 PHTF2Q8N3S3 785 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 POU5F2Q8N7G0 328 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 KDM1BQ8NB78 822 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 WFIKKN2Q8TEU8 576 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 KCNJ9Q92806 393 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 ARRDC3Q96B67 414 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 RIOK2Q9BVS4 552 aaKnown RBP12.46□□□□□ -0.41
CLCN6-206ENST00000376496 DERL2Q9GZP9 239 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 S1PR5Q9H228 398 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 ZNF576Q9H609 170 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 POPDC3Q9HBV1 291 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 APOBEC2Q9Y235 224 aaKnown RBP12.46□□□□□ -0.41
CLCN6-206ENST00000376496 VPS9D1Q9Y2B5 631 aa12.46□□□□□ -0.41
CLCN6-206ENST00000376496 MATN2O00339 956 aa12.46□□□□□ -0.42
CLCN6-206ENST00000376496 SMIM24O75264 130 aa12.46□□□□□ -0.42
CLCN6-206ENST00000376496 H2AFYO75367 372 aaKnown RBP12.46□□□□□ -0.42
CLCN6-206ENST00000376496 DNAJC8O75937 253 aaPredicted RBP12.46□□□□□ -0.42
CLCN6-206ENST00000376496 PAPLNO95428 1278 aa12.46□□□□□ -0.42
CLCN6-206ENST00000376496 VIPR1P32241 457 aa12.46□□□□□ -0.42
CLCN6-206ENST00000376496 SLC26A3P40879 764 aa12.46□□□□□ -0.42
CLCN6-206ENST00000376496 FCHO2Q0JRZ9 810 aa12.46□□□□□ -0.42
CLCN6-206ENST00000376496 ACSBG2Q5FVE4 666 aa12.46□□□□□ -0.42
CLCN6-206ENST00000376496 CERS6Q6ZMG9 384 aa12.46□□□□□ -0.42
CLCN6-206ENST00000376496 BEND7Q8N7W2 519 aaPredicted RBP12.46□□□□□ -0.42
CLCN6-206ENST00000376496 DCBLD1Q8N8Z6 715 aa12.46□□□□□ -0.42
CLCN6-206ENST00000376496 KIAA1191Q96A73 305 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms