RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 UBASH3AP57075 661 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 ZFYVE27Q5T4F4 411 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 CYB5D1Q6P9G0 228 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 TIPARPQ7Z3E1 657 aaKnown RBP22.9■■□□□ 1.26
C9orf47-202ENST00000375850 RBM12BQ8IXT5 1001 aaKnown RBP22.9■■□□□ 1.26
C9orf47-202ENST00000375850 STARD8Q92502 1023 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 C9orf72Q96LT7 481 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 RNF157Q96PX1 679 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 PLEKHG4BQ96PX9 1271 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 KLC4Q9NSK0 619 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 SIDT1Q9NXL6 827 aaKnown RBP22.9■■□□□ 1.26
C9orf47-202ENST00000375850 HECTD1Q9ULT8 2610 aa22.9■■□□□ 1.26
C9orf47-202ENST00000375850 CHUKO15111 745 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 KMOO15229 486 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 VEGFDO43915 354 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 TCN2P20062 427 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 SLC10A2Q12908 348 aaPredicted RBP22.89■■□□□ 1.25
C9orf47-202ENST00000375850 IL11RAQ14626 422 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 TMEM26Q6ZUK4 368 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 PTRH1Q86Y79 214 aaKnown RBP22.89■■□□□ 1.25
C9orf47-202ENST00000375850 TRIM48Q8IWZ4 208 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 GLYATL1Q969I3 302 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 TIMM29Q9BSF4 260 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 TBC1D10AQ9BXI6 508 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 BRD8Q9H0E9 1235 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 OR2AG1Q9H205 316 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 OSGEPL1Q9H4B0 414 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 APMAPQ9HDC9 416 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 PRDM8Q9NQV8 689 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 POT1Q9NUX5 634 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 KLHL3Q9UH77 587 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 NENFQ9UMX5 172 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 KCTD3Q9Y597 815 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 PCDHB3Q9Y5E6 796 aa22.89■■□□□ 1.25
C9orf47-202ENST00000375850 KCNK1O00180 336 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 UBXN7O94888 489 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 KDELR1P24390 212 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 TAS2R40P59535 323 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 INSCQ1MX18 579 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 WASH2PQ6VEQ5 465 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 TMC3Q7Z5M5 1100 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 NT5DC3Q86UY8 548 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 LRRTM4Q86VH4 590 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 CNTD1Q8N815 330 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.88■■□□□ 1.25
C9orf47-202ENST00000375850 CPLX3Q8WVH0 158 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 TRIB3Q96RU7 358 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 WASH6PQ9NQA3 447 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 RPS6KL1Q9Y6S9 549 aa22.88■■□□□ 1.25
C9orf47-202ENST00000375850 PRKAR1AP10644 381 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 ZFXP17010 805 aaPredicted RBP22.87■■□□□ 1.25
C9orf47-202ENST00000375850 AMD1P17707 334 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 VCLP18206 1134 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 PDK1Q15118 436 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 CCDC70Q6NSX1 233 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 CAVIN1Q6NZI2 390 aaKnown RBP22.87■■□□□ 1.25
C9orf47-202ENST00000375850 ABRAXAS1Q6UWZ7 409 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 ADGRG6Q86SQ4 1221 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 IMP4Q96G21 291 aaKnown RBP22.87■■□□□ 1.25
C9orf47-202ENST00000375850 ULBP3Q9BZM4 244 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 SLC25A51Q9H1U9 297 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 EPN3Q9H201 632 aa22.87■■□□□ 1.25
C9orf47-202ENST00000375850 PPP1R12AO14974 1030 aaPredicted RBP22.86■■□□□ 1.25
C9orf47-202ENST00000375850 KCNJ13O60928 360 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 ZNF7P17097 686 aaPredicted RBP22.86■■□□□ 1.25
C9orf47-202ENST00000375850 HNRNPH3P31942 346 aaKnown RBP22.86■■□□□ 1.25
C9orf47-202ENST00000375850 CDK18Q07002 472 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 FOXM1Q08050 763 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 ZBTB17Q13105 803 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 GALNT3Q14435 633 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 COLEC12Q5KU26 742 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 AGAP9Q5VTM2 703 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 C6orf15Q6UXA7 325 aaPredicted RBP22.86■■□□□ 1.25
C9orf47-202ENST00000375850 UNC5BQ8IZJ1 945 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 GPR26Q8NDV2 337 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 EID2BQ96D98 161 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 MAK16Q9BXY0 300 aaKnown RBP22.86■■□□□ 1.25
C9orf47-202ENST00000375850 GPR63Q9BZJ6 419 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 ZNF768Q9H5H4 540 aaKnown RBP22.86■■□□□ 1.25
C9orf47-202ENST00000375850 ZNF711Q9Y462 761 aa22.86■■□□□ 1.25
C9orf47-202ENST00000375850 ZFC3H1O60293 1989 aaKnown RBP22.86■■□□□ 1.25
C9orf47-202ENST00000375850 PDZK1P1A8MUH7 402 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 RECKO95980 971 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 GYPCP04921 128 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 OAS2P29728 719 aaKnown RBP22.85■■□□□ 1.25
C9orf47-202ENST00000375850 FOXK1P85037 733 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 AP1B1Q10567 949 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 SLC18A3Q16572 532 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 SKIDA1Q1XH10 827 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 DEFB109BQ30KR1 87 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 ALS2CLQ60I27 953 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 SLC9A4Q6AI14 798 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 PRSS42Q7Z5A4 293 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 PLD5Q8N7P1 536 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 RAPGEF5Q92565 580 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 ZDHHC12Q96GR4 267 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 VPS35Q96QK1 796 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 ANP32EQ9BTT0 268 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 RAB33BQ9H082 229 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 CBX8Q9HC52 389 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms